Gene Patl_3522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3522 
SymbolmraY 
ID4175301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4228323 
End bp4229399 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content49% 
IMG OID638056551 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_663078 
Protein GI109899823 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACTGG CCGATTGGCT ACAACAGTTT GAGCCAAGCT TTAGGGTCTT CTCGTATCTG 
ACGCTTCGTG CCATTTTGAG CACGCTAACG GCCCTGTTAA TCGCCGTTTT AATTGGCCCG
CGGATGATCC GTTGGTTGCA AACCATGCAA ATTGGTCAAA CGGTGCGTGA TGACGGCCCT
CAATCTCATC TGGCCAAATC AGGCACACCT ACTATGGGTG GCTTACTGAT TTTGGCGGCG
ATTGTGGTAA GTGTACTGTT ATGGGCAGAC TTAACCAATC GCTATGTTTG GGTCACGTTA
AGTGTCGTTG TCGGTTACGG CATTATCGGC TTTATTGATG ACTACCGTAA GGTCGTGCGT
AAAGACCCGA AAGGCTTGAT TGCGCGCTGG AAGTATTTTT GGCAGTCGGT TATTGCTATT
GGTGTCGCCT TGTATTTATA CGCCAGCCAG CAAGACCCAG CTGAAACTGC CTTGCTCGTG
CCATTTTTCA AAGATGTGAT GCCGCAAATG GGCATGTTCT TCGTTGTGAT GACTTATTTT
GTGATTGTCG GCACCAGTAA TGCGGTCAAT CTAACTGACG GTTTAGATGG CTTAGCTATC
GTGCCTACTG TGCTAGTGGC TGGTGCATTC GCGATTTTTG CTTACACCAC AGGTAACATT
AACTTTTCCG CTTACCTGAA TATTCCGTAT TTACCCTTGA CCAGTGAACT GGTGATTGTA
TGCACGGCCA TTGTCGGCGC GGGCCTTGGC TTTTTGTGGT TCAACACTTA CCCAGCCATG
GTGTTCATGG GCGATGTTGG CTCACTGGCA CTTGGCGGCA CGCTAGGGAT CATCGCTGTG
TTAGTGCGTC AAGAAATCGT ACTGGTGATC ATGGGCGGCG TATTTGTGGT GGAAACGCTC
TCAGTTATTT TGCAGGTGGG ATCATTTAAA TTGCGCGGCC AACGGATTTT CAGAATGGCG
CCAATCCACC ACCACTATGA ATTAAAAGGC TGGCCAGAGC CTCGCGTTAT CGTGCGATTC
TGGATCATCT CCATCATTTT AGTCTTGGTT GGCTTAGCCA CCTTGAAATT ACGTTAA
 
Protein sequence
MLLADWLQQF EPSFRVFSYL TLRAILSTLT ALLIAVLIGP RMIRWLQTMQ IGQTVRDDGP 
QSHLAKSGTP TMGGLLILAA IVVSVLLWAD LTNRYVWVTL SVVVGYGIIG FIDDYRKVVR
KDPKGLIARW KYFWQSVIAI GVALYLYASQ QDPAETALLV PFFKDVMPQM GMFFVVMTYF
VIVGTSNAVN LTDGLDGLAI VPTVLVAGAF AIFAYTTGNI NFSAYLNIPY LPLTSELVIV
CTAIVGAGLG FLWFNTYPAM VFMGDVGSLA LGGTLGIIAV LVRQEIVLVI MGGVFVVETL
SVILQVGSFK LRGQRIFRMA PIHHHYELKG WPEPRVIVRF WIISIILVLV GLATLKLR