Gene Patl_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3520 
Symbol 
ID4175299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4225522 
End bp4226985 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content48% 
IMG OID638056549 
Productcell division protein FtsW 
Protein accessionYP_663076 
Protein GI109899821 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02614] cell division protein FtsW 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAT CGACTTTCGC GACGCCTCTT CGCGCTATGT TTGCTCAGCG ACATGATGCT 
GCCCCAGCGG TGGTTCGCCC TTACGATGTG AGCTTGATTT TACTGGCGCT GTCGTTAATG
GCGATTGGCT TGGTTATTGT GACGTCTGCG TCTATGCCGG TGGCGTCTCG TTTGTTTGAC
AACCCGTTTC ATTTTGCTAT CCGCCATGGC ATCTATATCG TATTGGCGAT TGGTGCGGCC
TTAACCGTGA TGCAGATCCC GATGCAGTGG TGGCGCACCA GTAATGCTTG GTTATTGCTG
TTAGGTCTGG TGCTGTTGAT TGCCGTCTTA TTAGTAGGGC GCAGTGTCAA TGGCAGTACT
CGTTGGCTAG CGATAGGACC CATTACTATT CAAGCGGCCG AACCCGCTAA GTTATTCTTT
TTCTGCTATC TAGCGGGGTA CTTGGTTAGG CGTTATGAGG AAGTGACTGA AAACATTAAG
GGCTTTGCGA AGCCGTTAGT GGTGTTCTTT GCCTTTGCTG TACTGCTGCT ACTTCAACCT
GATTTAGGTA CCGTTGTGGT CATGCTATGC ACCACTATTG GGTTACTGTT TTTGGCGGGG
GCTAAACTGT GGCAGTTCTT TGGCTTGGCG TTTACCGGCG GCGCAGCAGT GACCTTCTTG
ATCATGTTCG AAGAATATCG CATGAAACGA ATTACCTCCT TTTTAGATCC TTGGGCCGAC
CCATTTGGCA GCGGTTACCA GTTAACTCAG TCCCTGATGG CCTATGGACG TGGCGATGTA
TTTGGACAAG GCCTAGGCAA CAGTTTACAA AAGTTGGAAT ACTTACCTGA AGCACACACT
GATTTTATCA TGGCTATCTT AGCAGAAGAG CTTGGTTTCG CTGGAGTGCT AACGGTGCTG
GCACTTATGC TATGCATAGT GCTCAAAGCC ATGAAAATGG GTAGCAAAGC ACTGCAAAAT
GAACGTCCTT TTGATGCCTA TCTTGCGTAC TCCATTGGTA TTTGGTTTAG CTTTCAAACC
GCAGTGAACG TGGGCGCGAG TGCCGGTATT TTGCCCACTA AAGGCCTTAC GTTCCCGCTA
TTAAGTTACG GCGGCTCTAG TTTGATTATT ATGGCTGCAG CAGTGGGTTT ATTGGTGCGT
ATCGATTTTG AAATGCGCGT TGAAGGTATT CAAGCCATCG ACCGAAGCGG CAAAGCGAAA
GCGTCTACAT CGAGCAGCAG AAAAAACAAA CCGAAAACAG CCAGTAGTGC AGGTAAGAAA
AAAGTCTCTA CTGTGCTTGA TGATGTGGCT TACGCCGTCG TCGATGACGT GCAAGACGAA
GAACAAGATA TCGATTCTAT CATGGATGAC TTTGCCCAAG ACGAATCTGC GCAAACAGTA
AGCCATCAAA CCAAACGTGC TAGCAAAAGC ACCAGTAAAA CCCCGCGTGG CAAGGACGAA
GAGCAGGAGG ATGGCTATGT CTAA
 
Protein sequence
MNTSTFATPL RAMFAQRHDA APAVVRPYDV SLILLALSLM AIGLVIVTSA SMPVASRLFD 
NPFHFAIRHG IYIVLAIGAA LTVMQIPMQW WRTSNAWLLL LGLVLLIAVL LVGRSVNGST
RWLAIGPITI QAAEPAKLFF FCYLAGYLVR RYEEVTENIK GFAKPLVVFF AFAVLLLLQP
DLGTVVVMLC TTIGLLFLAG AKLWQFFGLA FTGGAAVTFL IMFEEYRMKR ITSFLDPWAD
PFGSGYQLTQ SLMAYGRGDV FGQGLGNSLQ KLEYLPEAHT DFIMAILAEE LGFAGVLTVL
ALMLCIVLKA MKMGSKALQN ERPFDAYLAY SIGIWFSFQT AVNVGASAGI LPTKGLTFPL
LSYGGSSLII MAAAVGLLVR IDFEMRVEGI QAIDRSGKAK ASTSSSRKNK PKTASSAGKK
KVSTVLDDVA YAVVDDVQDE EQDIDSIMDD FAQDESAQTV SHQTKRASKS TSKTPRGKDE
EQEDGYV