Gene Patl_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3515 
Symbol 
ID4175294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4219959 
End bp4221188 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content46% 
IMG OID638056544 
Productcell division protein FtsA 
Protein accessionYP_663071 
Protein GI109899816 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0849] Actin-like ATPase involved in cell division 
TIGRFAM ID[TIGR01174] cell division protein FtsA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000329989 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAG TTACAGATAG AAAGCTAATT GTAGGCTTAG ACATTGGTAC CAGCATGGTA 
AAAGCCGTCG TCGGTGAGCT ACTTGACGAT GGTGGGATCA GCGTTATTGG TGTCGGTAGT
CATCCATCTA AAGGGATGGA TAAAGGTGGC GTAAACGATT TGAACTTAGT GGTTCAATCG
GTACAGCGTG CCATGAGCGA AATGGAATTA ATGGCTGATT GCCGGGTGTC GTCAGTGTTT
ATGTCGATCT CTGGGCGTCA TGTTCAATGC CAAAATGAAA GTGGCATGGT CCCCATCAAT
AACAAAGAAG TGACCCAAGA AGACGTTGAT AACGTGATCC ACGCCGCTCG CTCAGTGCCT
ATCGCCGCTG AACGTCGTTT GCTTCATGTA TTGCCACAAG AATTTACGAT TGACGTACAA
GAAGGGATAA AAAACCCAAT TGGCATGTCA GGAGTGCGTA TGGAAGCTCA AGCGCACATT
ATTACTTGCG CTGACGACAT GGCTAAAAAC TTAGTGAAAT GTGTAGAGCG TTGCGACTTA
ACGACAGACC AGTTGATTTT CTCATCGTTA GCCTCGAGTT ATGCGGTACT AACCGATGAT
GAAAAAGAGT TAGGTGTGTG CGTGGTTGAT ATCGGCGGTG GCACTATCGA TATTGTGATT
TACACAGACG GCGCCATTAG GCATACCGCT GTCGTTCCCG CTGCCGGTAA TCAAATTACC
AGTGATATTG CGAAAATATT CCGCACGCCT ATCAGTCATG CAGAAGACAT TAAAATTAAT
TATGCCTGTG CCCTAAAAGA CATGGTTAGC ATGGAAGAGA ACATCGAAGT GCATAGTGTC
GGTGGTAGAC CGTCTCGCGC TATGTCTCGT CATACCTTGG CAGAGGTTAT TGAACCAAGG
TATCAAGAGC TGTTCGAATT GGTGCAGAAA GAAATACGTA ATAGCGGCTT TGAAGAGCAG
ATAGCCGCAG GGATCGTGTT AACAGGCGGT ACTGCCAAAA TGGAAGGGGC GATTGAATTC
GCCGAAGAAA TTTTTCAAAT GCCTGTACGT GTGGGTGAGC CATTATCTAT CAAAGGTTTG
TCGGAATACG TGGAAGACCC AACATTTGCC ACAGCGATTG GGTTGCTTCA GTACGGAAAA
GAACACATTA CGGCCAAAAC AGCGGCCAAA ACGAAAGCGT CAGAAGGCGT TTGGGAACGA
ATTCAAAGTT GGTTTAAGGG CGAGTTTTAA
 
Protein sequence
MSKVTDRKLI VGLDIGTSMV KAVVGELLDD GGISVIGVGS HPSKGMDKGG VNDLNLVVQS 
VQRAMSEMEL MADCRVSSVF MSISGRHVQC QNESGMVPIN NKEVTQEDVD NVIHAARSVP
IAAERRLLHV LPQEFTIDVQ EGIKNPIGMS GVRMEAQAHI ITCADDMAKN LVKCVERCDL
TTDQLIFSSL ASSYAVLTDD EKELGVCVVD IGGGTIDIVI YTDGAIRHTA VVPAAGNQIT
SDIAKIFRTP ISHAEDIKIN YACALKDMVS MEENIEVHSV GGRPSRAMSR HTLAEVIEPR
YQELFELVQK EIRNSGFEEQ IAAGIVLTGG TAKMEGAIEF AEEIFQMPVR VGEPLSIKGL
SEYVEDPTFA TAIGLLQYGK EHITAKTAAK TKASEGVWER IQSWFKGEF