| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3512 |
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| Symbol | |
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| ID | 4175291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4216574 |
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| End bp | 4217473 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056541 |
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| Product | peptidase M23B |
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| Protein accession | YP_663068 |
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| Protein GI | 109899813 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000873252 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCTGA CACTACTGTA TCGCAGTAAA AAATCACGTT TTATTTATCG GCCTACTAAG
CGCCAGATAT TGCCGTGCTT TATTGTCATA TGCGGTTTAT TTCTTATTTC CAGTCGCTCT
ACAGATTTAC CCAATGAAAA CTTGGCTCGG TTGTCGTTAG CGCAATCTGG TTTACAACAG
CAACAGACCC AGCTAGACGA CCTTAAAACC ACCACTGAGC AACGTTTAGC AGCGGTGCTG
CAAAAATTAG CTGAAGCAGA AAGCCGCTTA GTTAAAGTGA ATGCATTAGG CGCAAGGCTA
GTAGAGCAGG CTCAATTAAA CCCTGATGAA TTTAGTTTTT CAGTGAGTGG CGAAGAAGCG
CAAGTATTGC CTGATACGCC AGTTGACGTG AGCCAATACA ATATGGTTTC CCGTATCGAA
ATCATGCTTG ATGAGTTAGC AGATAAAGAG AAGCAATTGG GTGCGCTTGA ATCTATCTTC
ATGAGTCACC ATATAACCGA AGAAAGCGCA TTGGCGGGCC GCCCAATTGA GGCTGGTTGG
CTATCATCGT ATTACGGTAT CAGAACCGAC CCATTTTCCG GTAAACCCAC CATGCACAAA
GGGTTAGATT TCGCCGGTGC AGAAGGGGAG CCCGTATTAG CCACTGGCGC AGGCATAGTA
ACGTGGGCGG CAACGCGATA TGGTTACGGT GAATTAGTAG AAATTGACCA TGGTAATGGC
TTGGTCACAC GATACGGGCA CAATAAGTCC GTAAAGGTAA AGATGGGTGA CGTAGTGACC
AAAGGTCAAT CAATCGCCTT GATGGGTAAT ACTGGTCGTT CAACCGGTGC TCATGTACAT
TATGAAGTTA TAAAACAAGG GCAACCACAA GACCCATTAC CCTTTGTATA TCGCAACTAG
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| Protein sequence | MSLTLLYRSK KSRFIYRPTK RQILPCFIVI CGLFLISSRS TDLPNENLAR LSLAQSGLQQ
QQTQLDDLKT TTEQRLAAVL QKLAEAESRL VKVNALGARL VEQAQLNPDE FSFSVSGEEA
QVLPDTPVDV SQYNMVSRIE IMLDELADKE KQLGALESIF MSHHITEESA LAGRPIEAGW
LSSYYGIRTD PFSGKPTMHK GLDFAGAEGE PVLATGAGIV TWAATRYGYG ELVEIDHGNG
LVTRYGHNKS VKVKMGDVVT KGQSIALMGN TGRSTGAHVH YEVIKQGQPQ DPLPFVYRN
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