Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3501 |
Symbol | |
ID | 4175280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4204304 |
End bp | 4205530 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638056530 |
Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
Protein accession | YP_663057 |
Protein GI | 109899802 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.175144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAAGTT ATGATGTGGT TATCGTCGGT GGCGGAATAG TCGGTTTAAC CGTTGCGCTC ACATTGGCGA GCGGTGAGCT TAACGTAGCG ATTATTGATG CGCAATCAGG TGACACCGCA CTTGGCGATA AACCTGAGCT ACGAGTCAGC ACTTTTACCC TAGCGACCCA AACCGTAATG CAAAATTTAG GCGTTTGGCC TTTACTGGCG CAAGAGCGGC TATGCGCTTA TGAGCACATG TCGGTGTGGG ATCAAGACAG TTTCGCCCAT ATTGGTTTTT CCCATAGCGA GGTAAAACAA GATTATCTTG GTCATGTAGT AGAAAATCAA AATTTAGCGC TAGCGCTGTG GGCGAAGGCA GAGCAAAGCC CTTGCATCAC GGTTCTGGCG CCAAACAAAG TCAGTAAAAT GGTATTTGGC CAACAAGAAA GCTTCTTAAC CCTAGATGAT GACACCATGC TAACGGCTAG GCTGGTGGTC GGTGCTGATG GTGCTAACTC CATGGTGCGG CAAAAAGCCA ATTTGCCGTT AACATTTTGG GATTACGAAC ATCATTCGAT TGTTGCCACA ATTAAAACCG AATTGCCTCA CGATAATACT GCTAGGCAGG TGTTTACCCC GAAAGGACCG TTAGCCTTTT TACCTTTGTG GGATGCGCAT CATTGTTCAA TTGTTTGGTC TCAGCAGGAG CCTGCCGCCA CCGCATTACT CGCGTTAGAT GATACCGCCT TTGAAAAAGC GCTTATGGCT GCGTTTGATA TGCGTTTAGG CATATGTGAA TTAGTCAGTG AGCGCAAGAG CTTCCCGTTA AAAATGCGGT ACGCGCGCCA ATGGGTAACC GATAGAGTAG CATTGGTTGG CGATGCCGCA CACACTATTC ACCCCTTAGC GGGTCAAGGT GCAAACCTAG GGATAATGGA TGGGGTGGCC TTAGCCGAAC AGGTGATCAA AATAGCTGAG CAAGGTAAGG ATATTGGTTT AACCAAAAAC TTACGTGAAT ATGAGCGCTG GCGCAAAACT GAAGCGGTGA AAATGATTGC GACCATGGAG TCATTCAAAC GCTTATTTGA TGGGGCAAAC CCAGTGCGAA AGTGGGTGCG TGACGTCGGC CTTAGCACCA TGAACCACTT GCCCAAAGCA AAACAGAAAA TTGTTCAGCA CGCGGTTGGA CTCGGTGGTG AACTGCCCCA CCTAGCGCAG AATAAACTGA CAAGGAAGGC GTCTTAG
|
Protein sequence | MQSYDVVIVG GGIVGLTVAL TLASGELNVA IIDAQSGDTA LGDKPELRVS TFTLATQTVM QNLGVWPLLA QERLCAYEHM SVWDQDSFAH IGFSHSEVKQ DYLGHVVENQ NLALALWAKA EQSPCITVLA PNKVSKMVFG QQESFLTLDD DTMLTARLVV GADGANSMVR QKANLPLTFW DYEHHSIVAT IKTELPHDNT ARQVFTPKGP LAFLPLWDAH HCSIVWSQQE PAATALLALD DTAFEKALMA AFDMRLGICE LVSERKSFPL KMRYARQWVT DRVALVGDAA HTIHPLAGQG ANLGIMDGVA LAEQVIKIAE QGKDIGLTKN LREYERWRKT EAVKMIATME SFKRLFDGAN PVRKWVRDVG LSTMNHLPKA KQKIVQHAVG LGGELPHLAQ NKLTRKAS
|
| |