Gene Patl_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3500 
Symbol 
ID4175279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4203804 
End bp4204271 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content47% 
IMG OID638056529 
ProductybaK/ebsC protein 
Protein accessionYP_663056 
Protein GI109899801 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00301765 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCAG CAATTAATTT ACTCATTAAG CAAAAAGTGG CCCATGAAGT GTTGCAATAT 
GAACATGACG CCAGTGCAGA ATCTTTCGGT TTAGAAGCCG CCGAAAAGCT CAACCTTGCG 
CCTAATTTGG TCTACAAAAC ACTCGTTGTA AAGCTAGACT CGCAAACCTT GTGCGTCGCT 
ATTTTACCTG TGGAGCGTAT GTTGAGCATG AAGCTTCTGG CCAAAGCTGC TGGGGCGAAA 
AAAGCCCAAA TGGCGGATAA AACCGAAGTC GAGCGAGTAA CAGGCTATGT GCTTGGCGGA 
GTTAGTCCGT TAGGCCAAAA GAAGCGATTG ACGACAATGA TCGATGAATC CGCTAAAGCG 
CTAACAAATA TGTACGTCAG TGCGGGTAAA CGTGGCCTAG AGATTAATAT AGCACCTCAA 
GCACTTACCC AACTGCTATC CGCTCGGTTT GCTGCTCTTT GTCAGTAA
 
Protein sequence
MTPAINLLIK QKVAHEVLQY EHDASAESFG LEAAEKLNLA PNLVYKTLVV KLDSQTLCVA 
ILPVERMLSM KLLAKAAGAK KAQMADKTEV ERVTGYVLGG VSPLGQKKRL TTMIDESAKA 
LTNMYVSAGK RGLEINIAPQ ALTQLLSARF AALCQ