Gene Patl_3497 details

Gene Information

• Locus tag: Patl_3497
• ID: 4175276
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 4200139
• End bp: 4202292
• Gene Length: 2154 bp
• Protein Length: 717 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 638056526
• Product: hypothetical protein
• Protein accession: YP_663053
• Protein GI: 109899798

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0161695
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTGGA CATTAGCCCA AGTAGGCACC TACACCCTTG CCACACCTCA GGGTATGCCC 
TTGCTTTTAT GTGTTGTGCT CGGTGTCGTG TTAATCACGG CTTGGCTAAC CAGTAGCGTT 
TTGATGCTCC GGGGCTCCCT AAGTTTTAAT AGCCAAGCAG CGCGTGCCAG CGCACCTATG 
GCAATAGCTT TAGTTTGCAT TAATACATTG GCGTTTGCGG CGTTGCTCGC CACTGTGCTC 
GATATTAAAA ACAGTACCAC GCACATTGAG CGCGCAGTTT TAGTGACAAA AGGCACTACC 
CCAGAGATGC TTGCAACGTT TGAAAACCAC ATTCAGCTGC ATTCAAATGG AAAATATACC 
CAGCGCTGGT TTGATTTAAA AAGTGAGCTA CAGCTTGATG ATGCCCAGCA CATACCTTCC 
CCTTCTTTAT TGGCGCATGC CATTGGAGAT ATGACTGAAC TAGTCGTACT CGGGGACGGG 
CTTAGCCCAG CTCAGTGGCA AACATTATTT TTAGCAACGG ATAACTGGGG TACGCCTGAA 
AACAGCAAGG TGGGAGTCAC GTTTATGCCA AGCGCTGAAA CCCTAGGCAT AGTGAATATA 
TCTTGGCAGA AACAGCTACA AATTGGGCAG GCATTACACA TTCGCGGTGC GCTATCTGGT 
GAAAGCGACA GCGAGGAAAA TGAGGATGAT GAAGCGCCAA GCGGCGTAAA ATCCTATATT 
TTGCAATTAG TCAGTCCAAG CGGCGAAGTT GAACAAGAAA TATCGTTAAG ACGGGGCGAA 
GCGTTTAGCT TAGTGACTCA CCCTAAAGCT GCTGGCCAAT GGCGCTACCC TTTACGGCTG 
CGTGATAAAA GCAGCAATGC CTTGTTAGAA GAAAACGATA TTGCTCTATC GGTTAGCCAG 
AATGACTCAC TGAGCGCACC ATTGAGCTCT GCACAAATCA ACACTGCGCT GCGCACAGCG 
ATTTGGCAAT CAGCCCCCTC TTTTGAAACC AAACACTTAA AGGAATGGAT TAGTGCGTCC 
GGTAACGCCG TTAATGTCAC CACTCAAATA AGCCAAGACG CTTATCTACG CCAATATATT 
AACCAACCTA CGCCAGACGC TAGCACAGTT ACCCCAATTC AACAGGATGA CCATTTTTAC 
CCAGCAAAGA CGTTAGCTGG CATTGACATT CTGTTTATGG ATGGCCGAGG TTTGAACAAC 
TTGTCAAAAG ACCAAACGCT GCGTTTACAG CAAGCGGTAG AGGGCGGCCT AGGCCTCTTC 
CTGTTCGCAG ATAGTAATTT GGTTTCAGAG GATACAAGAG ACCTAACAAA GCGCTTGAAT 
TTACCAGTAT TGCGCGAAGA TAAACAAGCT GCCGATGAGT TTACGATCGT CTACCCCAAG 
CAGTTTGTGC TTCGAGCAGC GCAAGCCCTG CCTGCACCGA CTGATTTAAC CTTACGTGTT 
GGGGCATTCA GATTTGATGA TGAAGAAGCT GAAACATTAC TGGTAGCGCC AAACGGGCGA 
TCGCTAGTCA AACGTCATTC CCAGGGGTTG GGCCAAGTTG CTATTACCTT ATTGCCCCGC 
ACCTATGAGT GGAAGTTAAA TCAAACAAAC GGAGAATATG AGCGGCTGTG GCATTACCTC 
ATAGAACACA TTGCGCGCAA TTCAAGCGCG AATTATTGGC TAAACGAGCC CACTTCAGGG 
CCGGTATTTG AGCGAAGCCA CGGCGACGCG TGTTTGCGTA TCGCGAGTAA GAACCACAAT 
TTTGAAGTCT CAATGGATTA CGTTCAAAGG CCAAGTAACG AGCTTGAGCA GCAACCTTTG 
ATTTTAAACC AACGCCCTGA GCAACCTAAC ATCGCGTGCG CCCATTATTG GCCTGAATCG 
TCGGGTTGGC ATCGTATATC GGCTTCAACA CCACAGAATA GTCAGCCTAA TAGCACCAAG 
ATTACAAGAG GAGTAAGTAA TGCTATTACC GCACAGCAAT ACCGATATGT GTATTCACTA 
GATTCATGGC TTGCAGCCCA GCAAGCAGCT AAGCACTGGG CGAGTCATGG GGTGGCAGAC 
GCTCCGGCAA AAACAAATTT GCGCCCCCTG AACGTCACAC TGAATAAAGG CGCACCGTTC 
GCTATGTTGG TTCTTCTGCT CAGTGCACTA TGGCTAATAC GCCGTTTACG TTAA 

 

Protein sequence

MSWTLAQVGT YTLATPQGMP LLLCVVLGVV LITAWLTSSV LMLRGSLSFN SQAARASAPM 
AIALVCINTL AFAALLATVL DIKNSTTHIE RAVLVTKGTT PEMLATFENH IQLHSNGKYT 
QRWFDLKSEL QLDDAQHIPS PSLLAHAIGD MTELVVLGDG LSPAQWQTLF LATDNWGTPE 
NSKVGVTFMP SAETLGIVNI SWQKQLQIGQ ALHIRGALSG ESDSEENEDD EAPSGVKSYI 
LQLVSPSGEV EQEISLRRGE AFSLVTHPKA AGQWRYPLRL RDKSSNALLE ENDIALSVSQ 
NDSLSAPLSS AQINTALRTA IWQSAPSFET KHLKEWISAS GNAVNVTTQI SQDAYLRQYI 
NQPTPDASTV TPIQQDDHFY PAKTLAGIDI LFMDGRGLNN LSKDQTLRLQ QAVEGGLGLF 
LFADSNLVSE DTRDLTKRLN LPVLREDKQA ADEFTIVYPK QFVLRAAQAL PAPTDLTLRV 
GAFRFDDEEA ETLLVAPNGR SLVKRHSQGL GQVAITLLPR TYEWKLNQTN GEYERLWHYL 
IEHIARNSSA NYWLNEPTSG PVFERSHGDA CLRIASKNHN FEVSMDYVQR PSNELEQQPL 
ILNQRPEQPN IACAHYWPES SGWHRISAST PQNSQPNSTK ITRGVSNAIT AQQYRYVYSL 
DSWLAAQQAA KHWASHGVAD APAKTNLRPL NVTLNKGAPF AMLVLLLSAL WLIRRLR