| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3483 |
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| Symbol | psd |
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| ID | 4175262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4182428 |
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| End bp | 4183288 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056512 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_663039 |
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| Protein GI | 109899784 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.645642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCGATT CGATAAAAAT TGCATTGCAA TACATTACAC CTAAGCATCT GATTTCACGC
TTAGTAGGTA AACTCGCCGC CGCTAAAGCG GGTGGCTTAA CCACTGGGTT AATTAAGCTA
TTTATTAAAC AATATAAGGT GAACATGGCC GAAGCTGAGC GTGAAAACCC CGCTGATTAC
GCTTCGTTCA ATGAGTTTTT CACCCGCGCT TTAAAAGATG ACGCCCGCGT TATTTGCCCT
AACGAGCAAG ACTTAGCGAT GCCAGTAGAT GGCGCAGTAA GTCAGTTAGG CGACATCAAG
CACGACAGTA TATTTCAAGC AAAAGGCCAT GATTACAGCC TAACGACTTT GTTAGGCGGT
AAACCTGAAT TAGCGACTGC TTTCAAAAAC GGTAAATTTG CCACTGTGTA TTTATCGCCG
AAAGATTATC ACCGCATTCA TATGCCCATG GACGGCCAGC TAACTGATAT GGTGTATGTG
CCTGGTGAAC TTTTTTCTGT TAGCCCGTTA ACCGCTGAGC GTGTACCAGG TTTATTCGCC
CGTAATGAAC GCGTCGTGGC TATTTTTGAT ACCCCAAAAG GCAAGATGGC CATGGTGTTG
GTGGGAGCCA CCATTGTTGC CAGCATTGAA ACCGTTTGGG CAGGCACAGT GTCACCACCG
GTAGGTAAAA ATGTTGTTCA TTGGCAGTAC CCAAGCGAAG GTGAAGACGC TGTTTTTCTT
AAAAAAGGTG ACGAGTTAGG TCGCTTCAAA TTAGGTTCAA CCATAGTGGC GTGTTTTGAG
CCTGACATGG TGGAGTTCGC AGATTATAGC GCTGGAGATG ACACTCGCCT CGGTGATGTT
TTCGCTACTC TGACTCAATA G
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| Protein sequence | MFDSIKIALQ YITPKHLISR LVGKLAAAKA GGLTTGLIKL FIKQYKVNMA EAERENPADY
ASFNEFFTRA LKDDARVICP NEQDLAMPVD GAVSQLGDIK HDSIFQAKGH DYSLTTLLGG
KPELATAFKN GKFATVYLSP KDYHRIHMPM DGQLTDMVYV PGELFSVSPL TAERVPGLFA
RNERVVAIFD TPKGKMAMVL VGATIVASIE TVWAGTVSPP VGKNVVHWQY PSEGEDAVFL
KKGDELGRFK LGSTIVACFE PDMVEFADYS AGDDTRLGDV FATLTQ
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