| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3482 |
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| Symbol | |
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| ID | 4175261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4181239 |
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| End bp | 4182267 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056511 |
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| Product | ribosome-associated GTPase |
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| Protein accession | YP_663038 |
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| Protein GI | 109899783 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.845882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGAAAA AACCAAAACT TACCCATAAA CAACGTCGAC AAGTCTCACA TAATCGCACA
AAGCGGTTAG CTGAACCGGC AACCACCCCC ACCGACGATC AATTAGAAGA TCAGCAATCC
GGTCGAGTGA TCGGCCGTTT CGGTAAGCAT GCCGACGTGG AAGACAAGGA CGGCAATATT
CATCGCTGTC ACATCCGCCG CACCGTGCTA AGTGTAGTGT GTGGCGACGA TGTGCTATTT
CGCCCAGGCA AAGACGGCAC TGAAAGCATC AGTGGCGTAA TTGAAATAGT ACAAGACCGT
AAATCGGTGC TCACGCGCCC CGATTTTTAC GACGGCGTAA AACCCGTGGC CGCCAACATT
GATCAAATCA TAATCGTGAG CTCGGTCATA CCGGCCCTGT CTTTAAACAT TATCGATCGC
TACTTGGTGG CCTCAGAAGA CGTTGGAATA GAACCCGTTA TCTTGCTCAA CAAAGTAGAA
CTGTTAAGTG CAGCTGAACG TGAACATGTT GAAGAACAAT TACAAATTTA CCGAAATATT
GGCTACCGCG TGGTGTACAC AAGTTGTAAA ACCCGCACCG GGATCAGCGA TCTCGCTCTG
TGTTTGAAAG ACAAGGTTAG TGTATTTGTC GGTCAATCAG GTGTAGGTAA ATCAAGCTTG
GTCAACGAAT TACTACCTGA AGCCAAAGAG ATTACCAATG AAGTATCGGA TAACTCTGGC
TTAGGCCAGC ACACCACGAC CACAGCCAAG TTACTGCACT TCCCACAAGG CGGTGATTTG
ATTGATTCAC CTGGTGTGCG CGAATTTGCT TTGTGGCACA TGCCCATGGA GCGCCTGACC
TGGGGCTTTA AAGAATTTAG AGATTACATA GGTGGGTGTA AATTCCGCGA TTGCACGCAT
GCTGACGACC CAGGTTGTAT CATTCGAGCG GCTGCAGAAA AAGGCGATAT CAGCATGCTA
CGCTATGAGA GCTACCACAA AATACTGTCA AATTTAGATG AGCAGCGTCC TTCGCACAGT
AAGGTATAA
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| Protein sequence | MAKKPKLTHK QRRQVSHNRT KRLAEPATTP TDDQLEDQQS GRVIGRFGKH ADVEDKDGNI
HRCHIRRTVL SVVCGDDVLF RPGKDGTESI SGVIEIVQDR KSVLTRPDFY DGVKPVAANI
DQIIIVSSVI PALSLNIIDR YLVASEDVGI EPVILLNKVE LLSAAEREHV EEQLQIYRNI
GYRVVYTSCK TRTGISDLAL CLKDKVSVFV GQSGVGKSSL VNELLPEAKE ITNEVSDNSG
LGQHTTTTAK LLHFPQGGDL IDSPGVREFA LWHMPMERLT WGFKEFRDYI GGCKFRDCTH
ADDPGCIIRA AAEKGDISML RYESYHKILS NLDEQRPSHS KV
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