| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3469 |
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| Symbol | |
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| ID | 4175246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4163410 |
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| End bp | 4164135 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056496 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_663025 |
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| Protein GI | 109899770 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGTAT TTCATCCTTG GAGCCCTATG CCCGCCCTTA AACGTCTTGA CCAGCTACTG
AGTAATTTAG GCTATTGCAG CCGCAAAGAA GCCCGATACT TACTCAAAGG CAAACGCGTT
ACCGTCAAAG GTGAATTCGC TAAATCTCCC GCGTTAAAAG TTGATCCTGC CACCGTGCGG
GTAGACGGCG AAGCCCTTGA TGCTCCTGAT GGCATTCTCG TGATGCTGAA TAAGCCCTTA
GGTTATGTGT GCAGTCATGA CAATAACGAG GGCATGCGTA TTTACGATTT GCTGCCTGAG
CGCTGGGAAT TTCGAAACCC AAAAATAGTC AGCGTCGGCC GATTAGACAA AGACACCAGC
GGACTTATTC TAGTGACCGA TGACACCAAG TTAGTACATC AACTCACGTC CCCCAAGCAC
CACGTAGACA AGGTGTATCA AGTGAGCGTG GATTGCCCGT TGCAAAGTGA CATCATTGAT
TCATTCGCTA AAGGCGTGGT ATTGGGTGAA GGGGCTGAGC AGTGCTTGCC CGCGAAAATA
GAAATAGTCA GTGAAAATGT AGCGAACGTG ACGTTAAATG AAGGAAAATA TCATCAAGTG
AGGCGTATGT TTGCCGCTTG CGGTTATCAC GTTGAAGCCC TGCATCGCAG TCAATTTGGT
CAATACAGGC TGCAAGATTT AGCCCAAGGC GAGTGGCAAA CGGTTGCTCC TCCAAGTGTA
ATTTAA
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| Protein sequence | MFVFHPWSPM PALKRLDQLL SNLGYCSRKE ARYLLKGKRV TVKGEFAKSP ALKVDPATVR
VDGEALDAPD GILVMLNKPL GYVCSHDNNE GMRIYDLLPE RWEFRNPKIV SVGRLDKDTS
GLILVTDDTK LVHQLTSPKH HVDKVYQVSV DCPLQSDIID SFAKGVVLGE GAEQCLPAKI
EIVSENVANV TLNEGKYHQV RRMFAACGYH VEALHRSQFG QYRLQDLAQG EWQTVAPPSV
I
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