Gene Patl_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3458 
Symbol 
ID4175235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4150342 
End bp4151037 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content42% 
IMG OID638056485 
ProductGrxB family glutaredoxin 
Protein accessionYP_663014 
Protein GI109899759 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2999] Glutaredoxin 2 
TIGRFAM ID[TIGR02182] Glutaredoxin, GrxB family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0142149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCTC ATTTAGACTT GAGGAATCAT TTTATTATGT CGATTATGCA CTTATATATT 
TACGACCATT GCCCATACTG TGTTATGGCA CGTATGCCTT TTGCTATGAA AAACGTATCT
GTCGAACTAA CCGTGTTACC TAGCGACGAT GAAGCAACAC CGATAGCCAT GATAGGCGTT
AAAGCATGCC CAATTTTGAA AAAGCCTGAT GGTAGCTTTA TGCCTGAAAG CATGGATATA
GTCAGCTATA TTGACCAACT TGACGGCAGC CCGATATTTT CACCCTCAGC GAATCGAGCA
GACGTATCGG CTTGGTTGAA AGACGTCAAC TTATTAATGA AGCAACTACT TTACCCAAGG
TGGGTAACCT CACCAGTGAA GGAGTTTCAA ACACAAAGTG CGATAGATTA TTTCACTCAC
AAAAAAACCA AGGAACTTGG CTCTTTTGCT GAGGCATTGG CCAATAGCAA ATCACTCATC
AAAGCATTTG AAGATAAGTT AGGGGAGTTG GCGCACATGT TACACAGCGA AACAGGTGTG
AATGAGCAGC TTTCTATTGA CGATATAACC TTATTTGGCC GATTACGGGG CATCACCTTA
ATTAAAGGGC TAACAATACC GCCAAAAGTA GGCGCCTATC TAGATTACTT TTCAACAACC
TGTAAAATTC CTCTGTTTTA CGATGTCGCG CAATAA
 
Protein sequence
MSAHLDLRNH FIMSIMHLYI YDHCPYCVMA RMPFAMKNVS VELTVLPSDD EATPIAMIGV 
KACPILKKPD GSFMPESMDI VSYIDQLDGS PIFSPSANRA DVSAWLKDVN LLMKQLLYPR
WVTSPVKEFQ TQSAIDYFTH KKTKELGSFA EALANSKSLI KAFEDKLGEL AHMLHSETGV
NEQLSIDDIT LFGRLRGITL IKGLTIPPKV GAYLDYFSTT CKIPLFYDVA Q