Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3440 |
Symbol | |
ID | 4175217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4126663 |
End bp | 4127505 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056471 |
Product | hypothetical protein |
Protein accession | YP_663000 |
Protein GI | 109899745 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.377805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATTT ACCAAGGTAA TATTCGCAAA ATGCGCGTAT CCACCGATGC TGAGCATCTT GCCCAATATC AATTGCCCAT AGGCGAGCAA CTCATTGATA TGAACCCGCT GATCGGTAAA GCGCTTAACG TCAGTTTCGA TAACCAGATC AACTGCGTGC ATTGCCAAGC AAAAACCAAG AAAAGCTTCA ATCAAGGCTA CTGTTACCGC TGCCTAACGA AGTTGGCACA GTGCGACACC TGTATTATTA AGCCTGAACT TTGCCATTAT GACGCTGGCA CCTGCCGTGA ACCTAGCTGG GGCGAAGCAA ATTGCCTGTC AGATCATTAC GTATATCTAG CCAATACGGG GACGATTAAA GTGGGGATTA CTCGTCATGT CAGCGATGCA GTATCAAGTC GCTGGCTCGA CCAAGGTGCC ACTCAGGCGA TGGCCATCAT GAGAGTACAA AACCGCCTAA CAAGTGGTTT AGTCGAAACT GCCATGAAAG AGTTTATTGC GGATAAAACC AATTGGCGCA CCATGCTTAA AAGCCAACCT GACACTGCCG ATTTACAGCA ATTAAAAGAA GATCTCATCA CCGAAATAGA AGATCAATTA GACGAAATTA CCGAAGAGTA TGGTTTTCAA GCCATCGATA TTCTTGATTT ACCCGCGGTT GATATTCATT ACCCAGTGGA CCAATATCCA GAAAAAGTAA AGTCCATCAA TCTAGACAAA GAACTGTCTT TCAGTGGCGT ACTACAAGGC ATTAAAGGCC AATACTGGAT GTTAGATGGG GATCGCGTGA TCAACATGCG TAAGTATTCC GGTTACCACC TAAGTATTGA AACCCCTGAG TAA
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Protein sequence | MTIYQGNIRK MRVSTDAEHL AQYQLPIGEQ LIDMNPLIGK ALNVSFDNQI NCVHCQAKTK KSFNQGYCYR CLTKLAQCDT CIIKPELCHY DAGTCREPSW GEANCLSDHY VYLANTGTIK VGITRHVSDA VSSRWLDQGA TQAMAIMRVQ NRLTSGLVET AMKEFIADKT NWRTMLKSQP DTADLQQLKE DLITEIEDQL DEITEEYGFQ AIDILDLPAV DIHYPVDQYP EKVKSINLDK ELSFSGVLQG IKGQYWMLDG DRVINMRKYS GYHLSIETPE
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