Gene Patl_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3440 
Symbol 
ID4175217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4126663 
End bp4127505 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content45% 
IMG OID638056471 
Producthypothetical protein 
Protein accessionYP_663000 
Protein GI109899745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.377805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTT ACCAAGGTAA TATTCGCAAA ATGCGCGTAT CCACCGATGC TGAGCATCTT 
GCCCAATATC AATTGCCCAT AGGCGAGCAA CTCATTGATA TGAACCCGCT GATCGGTAAA
GCGCTTAACG TCAGTTTCGA TAACCAGATC AACTGCGTGC ATTGCCAAGC AAAAACCAAG
AAAAGCTTCA ATCAAGGCTA CTGTTACCGC TGCCTAACGA AGTTGGCACA GTGCGACACC
TGTATTATTA AGCCTGAACT TTGCCATTAT GACGCTGGCA CCTGCCGTGA ACCTAGCTGG
GGCGAAGCAA ATTGCCTGTC AGATCATTAC GTATATCTAG CCAATACGGG GACGATTAAA
GTGGGGATTA CTCGTCATGT CAGCGATGCA GTATCAAGTC GCTGGCTCGA CCAAGGTGCC
ACTCAGGCGA TGGCCATCAT GAGAGTACAA AACCGCCTAA CAAGTGGTTT AGTCGAAACT
GCCATGAAAG AGTTTATTGC GGATAAAACC AATTGGCGCA CCATGCTTAA AAGCCAACCT
GACACTGCCG ATTTACAGCA ATTAAAAGAA GATCTCATCA CCGAAATAGA AGATCAATTA
GACGAAATTA CCGAAGAGTA TGGTTTTCAA GCCATCGATA TTCTTGATTT ACCCGCGGTT
GATATTCATT ACCCAGTGGA CCAATATCCA GAAAAAGTAA AGTCCATCAA TCTAGACAAA
GAACTGTCTT TCAGTGGCGT ACTACAAGGC ATTAAAGGCC AATACTGGAT GTTAGATGGG
GATCGCGTGA TCAACATGCG TAAGTATTCC GGTTACCACC TAAGTATTGA AACCCCTGAG
TAA
 
Protein sequence
MTIYQGNIRK MRVSTDAEHL AQYQLPIGEQ LIDMNPLIGK ALNVSFDNQI NCVHCQAKTK 
KSFNQGYCYR CLTKLAQCDT CIIKPELCHY DAGTCREPSW GEANCLSDHY VYLANTGTIK
VGITRHVSDA VSSRWLDQGA TQAMAIMRVQ NRLTSGLVET AMKEFIADKT NWRTMLKSQP
DTADLQQLKE DLITEIEDQL DEITEEYGFQ AIDILDLPAV DIHYPVDQYP EKVKSINLDK
ELSFSGVLQG IKGQYWMLDG DRVINMRKYS GYHLSIETPE