Gene Patl_3435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3435 
Symbol 
ID4175212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4118991 
End bp4120673 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content43% 
IMG OID638056466 
Productsulfatase 
Protein accessionYP_662995 
Protein GI109899740 
COG category[R] General function prediction only 
COG ID[COG2194] Predicted membrane-associated, metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG CGGCCGCCCA AACACCAATA CGAAGCGAAT GGTTACGGGC TTTTAAAATT 
CCCCCTCAAC TTGTCATGCT GCTCGCAGCG CTATTTGTCA CGCTAACGGG CAATCACACC
TTTTTCGGCC ATCTTGAGAC AATTTACTCT TGGCAAAATA ATGCATTATT CATCTGCTCA
GTTGGCGCTA TTTTATGGGC ATTAACATCT ATTGTGTCAA TCGTATTAAA TTGGTTTATG
CCGGTAAAAT TAGCGTTATC CATCGTGCTT ATTACGGGGG CAATATGCAG CTATTTTACC
GATGGTTTTG GCGTTATTTT TGATATCGAC ATGATGCGTA ATATGTTTGC CACTGACACC
AGCGAAGCGG CCGATATACT CAACTTTGGT TTGCTTAATC ACGTCTTGTT ATTTGGAGCG
ATCCCGATAG TTTTTTTTAA TCTGTTGCCA CTGAATAAAC AACCCAGATT AAAAGACATT
AAGCGCCGCT TTTTGATGAC GGGGTTTACC TTAGTGATTG GCATAAGCGT TATCGGCGGC
AGTTTATTTG CTTTTAGTGG TCAGTACGCG AGCTTTTTTC GTGAACACAA ATCCGTGCGT
TACTACACGA ATCCAATACA ACCTATGTAT TCATTCGTCG CATTTCTGAC GCAAAAGGTT
CGCTCTGCTG CTTCCAGGCA ATTCGTGTTC CAAACGTCCC GTGCTGCCAT TCCAGACACA
GATTTGAATC GAGAGCTCGT GATTGTGGTT GTCGGTGAAA CCGCTCGCGC TGATCACTTC
TCAGTCAATG GCTACGAGCG TGAAACCACC CCTTTGTTAG CCAAAGAAAC TGATTTAGTC
TCTTTCAGCC AAATCAGTAG TTGCGGCACA TCCACCGCAG TTTCAGTACC TTGTATGTTT
TCCATTCTGG GTCGTGATGA CTTTGATGCA GACAACAGCA AAACCACAGA AAATGTGCTA
GATATTGTGG CTAAAGCCAA TATTAGCGTG CAATGGCGGG ACAATAATTC TGATTCAAAA
GGGGTCGCAG AGCGCATTCC CTATATAAGT TACAAAACTA GCGAAACGAA CCCAGTTTGT
GATGAAAAGC GGCAACCCAA AGAGCAAAAA TATAGAGAGT GTCGTGATGA AGGTATGCTT
GATGGGCTAC AAGAATTTAT TAACGGACAA GAGCAAGACA TACTCATTGT ACTACATCAA
ATGGGCAGCC ACGGCCCTGC ATATAGTAAG CGCTACCCGT CAGCATTTGA AAAATTCACG
CCAGCATGTC AAACCAGTGA ACTATCAATG TGCAGCGACG AAGAAATTAT CAATGCTTAT
GACAATACCA TCCTCTACAC AGATTACTTT TTAGCAAAAG TCATTGGGTT GTTAAAACGC
AACACTCCTC GTTACGAAAC AGCCATGATT TACGTCAGCG ATCATGGTGA ATCTTTAGGT
GAAAACAAGG TCTATTTGCA CGGTTTACCC TACATGTTCG CACCCAAAGC GCAAACGCAT
GTGCCGATAA TAGTGTGGGC GGGTGCATCT TCGGATATTG ATATTGCAAA AACCCGTGAG
TTAAAAGATT TACCTAATTC CCATGATGCA TTGGCTCAAG CCATTTTACT AAGCATGGAA
GTTGATTCAG ACGTAAAGCT CCCCCCTATG TTCCCGTTGT TAGTAATGAA ATCGGATGAC
TAA
 
Protein sequence
MNKAAAQTPI RSEWLRAFKI PPQLVMLLAA LFVTLTGNHT FFGHLETIYS WQNNALFICS 
VGAILWALTS IVSIVLNWFM PVKLALSIVL ITGAICSYFT DGFGVIFDID MMRNMFATDT
SEAADILNFG LLNHVLLFGA IPIVFFNLLP LNKQPRLKDI KRRFLMTGFT LVIGISVIGG
SLFAFSGQYA SFFREHKSVR YYTNPIQPMY SFVAFLTQKV RSAASRQFVF QTSRAAIPDT
DLNRELVIVV VGETARADHF SVNGYERETT PLLAKETDLV SFSQISSCGT STAVSVPCMF
SILGRDDFDA DNSKTTENVL DIVAKANISV QWRDNNSDSK GVAERIPYIS YKTSETNPVC
DEKRQPKEQK YRECRDEGML DGLQEFINGQ EQDILIVLHQ MGSHGPAYSK RYPSAFEKFT
PACQTSELSM CSDEEIINAY DNTILYTDYF LAKVIGLLKR NTPRYETAMI YVSDHGESLG
ENKVYLHGLP YMFAPKAQTH VPIIVWAGAS SDIDIAKTRE LKDLPNSHDA LAQAILLSME
VDSDVKLPPM FPLLVMKSDD