Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3435 |
Symbol | |
ID | 4175212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4118991 |
End bp | 4120673 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638056466 |
Product | sulfatase |
Protein accession | YP_662995 |
Protein GI | 109899740 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAG CGGCCGCCCA AACACCAATA CGAAGCGAAT GGTTACGGGC TTTTAAAATT CCCCCTCAAC TTGTCATGCT GCTCGCAGCG CTATTTGTCA CGCTAACGGG CAATCACACC TTTTTCGGCC ATCTTGAGAC AATTTACTCT TGGCAAAATA ATGCATTATT CATCTGCTCA GTTGGCGCTA TTTTATGGGC ATTAACATCT ATTGTGTCAA TCGTATTAAA TTGGTTTATG CCGGTAAAAT TAGCGTTATC CATCGTGCTT ATTACGGGGG CAATATGCAG CTATTTTACC GATGGTTTTG GCGTTATTTT TGATATCGAC ATGATGCGTA ATATGTTTGC CACTGACACC AGCGAAGCGG CCGATATACT CAACTTTGGT TTGCTTAATC ACGTCTTGTT ATTTGGAGCG ATCCCGATAG TTTTTTTTAA TCTGTTGCCA CTGAATAAAC AACCCAGATT AAAAGACATT AAGCGCCGCT TTTTGATGAC GGGGTTTACC TTAGTGATTG GCATAAGCGT TATCGGCGGC AGTTTATTTG CTTTTAGTGG TCAGTACGCG AGCTTTTTTC GTGAACACAA ATCCGTGCGT TACTACACGA ATCCAATACA ACCTATGTAT TCATTCGTCG CATTTCTGAC GCAAAAGGTT CGCTCTGCTG CTTCCAGGCA ATTCGTGTTC CAAACGTCCC GTGCTGCCAT TCCAGACACA GATTTGAATC GAGAGCTCGT GATTGTGGTT GTCGGTGAAA CCGCTCGCGC TGATCACTTC TCAGTCAATG GCTACGAGCG TGAAACCACC CCTTTGTTAG CCAAAGAAAC TGATTTAGTC TCTTTCAGCC AAATCAGTAG TTGCGGCACA TCCACCGCAG TTTCAGTACC TTGTATGTTT TCCATTCTGG GTCGTGATGA CTTTGATGCA GACAACAGCA AAACCACAGA AAATGTGCTA GATATTGTGG CTAAAGCCAA TATTAGCGTG CAATGGCGGG ACAATAATTC TGATTCAAAA GGGGTCGCAG AGCGCATTCC CTATATAAGT TACAAAACTA GCGAAACGAA CCCAGTTTGT GATGAAAAGC GGCAACCCAA AGAGCAAAAA TATAGAGAGT GTCGTGATGA AGGTATGCTT GATGGGCTAC AAGAATTTAT TAACGGACAA GAGCAAGACA TACTCATTGT ACTACATCAA ATGGGCAGCC ACGGCCCTGC ATATAGTAAG CGCTACCCGT CAGCATTTGA AAAATTCACG CCAGCATGTC AAACCAGTGA ACTATCAATG TGCAGCGACG AAGAAATTAT CAATGCTTAT GACAATACCA TCCTCTACAC AGATTACTTT TTAGCAAAAG TCATTGGGTT GTTAAAACGC AACACTCCTC GTTACGAAAC AGCCATGATT TACGTCAGCG ATCATGGTGA ATCTTTAGGT GAAAACAAGG TCTATTTGCA CGGTTTACCC TACATGTTCG CACCCAAAGC GCAAACGCAT GTGCCGATAA TAGTGTGGGC GGGTGCATCT TCGGATATTG ATATTGCAAA AACCCGTGAG TTAAAAGATT TACCTAATTC CCATGATGCA TTGGCTCAAG CCATTTTACT AAGCATGGAA GTTGATTCAG ACGTAAAGCT CCCCCCTATG TTCCCGTTGT TAGTAATGAA ATCGGATGAC TAA
|
Protein sequence | MNKAAAQTPI RSEWLRAFKI PPQLVMLLAA LFVTLTGNHT FFGHLETIYS WQNNALFICS VGAILWALTS IVSIVLNWFM PVKLALSIVL ITGAICSYFT DGFGVIFDID MMRNMFATDT SEAADILNFG LLNHVLLFGA IPIVFFNLLP LNKQPRLKDI KRRFLMTGFT LVIGISVIGG SLFAFSGQYA SFFREHKSVR YYTNPIQPMY SFVAFLTQKV RSAASRQFVF QTSRAAIPDT DLNRELVIVV VGETARADHF SVNGYERETT PLLAKETDLV SFSQISSCGT STAVSVPCMF SILGRDDFDA DNSKTTENVL DIVAKANISV QWRDNNSDSK GVAERIPYIS YKTSETNPVC DEKRQPKEQK YRECRDEGML DGLQEFINGQ EQDILIVLHQ MGSHGPAYSK RYPSAFEKFT PACQTSELSM CSDEEIINAY DNTILYTDYF LAKVIGLLKR NTPRYETAMI YVSDHGESLG ENKVYLHGLP YMFAPKAQTH VPIIVWAGAS SDIDIAKTRE LKDLPNSHDA LAQAILLSME VDSDVKLPPM FPLLVMKSDD
|
| |