| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3432 |
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| Symbol | |
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| ID | 4175209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4114966 |
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| End bp | 4116252 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056463 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_662992 |
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| Protein GI | 109899737 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCAAACTG CGTTAAAGAA ATTATCTGCC ATAGTATGTT GCTCATTGCT AAGCGGCATC
AGTGTGGCTG CTCAACAAGA TGCTACTGAC ATGAATGTGT TAGGTGATCA GGAGGTTGTA
AGTGAGGCCC AAGAAGTGGC GAGCCCACAG GCCTTATTTG CACAATGTGT TGTTGACTTG
CAGGGTCAAG CTAAAACAGC CGGTGTCTCT AAGCGTGTTA CCGATGAAGT GCTTGGCGGC
GCCAGATACA AAGAAAAAAT TATCTCGCTG GATCGAAATC AACCTGAGTT TGTTCAAACC
TTTACTGATT ACTTTGAAAA ACGGGTGAAT ACCTGGCGCA TTGAAAAAGG CCAGCAAATG
ATGGCCAAGC ACCGTGCTTT TCTGGGGGAG TTAAATAAAG AATACGGTGT GCCAGCTCAG
TACCTTTTAG CTTTTTGGGG CTTAGAAACG AATTTTGGCT CTTACAAGGG AAAAAGCCCG
GTTATTGATT CGCTAGTCAC TTTGGCGTGT GACAATCGCC GTAGCCGTTA TTTTTCCAGT
GAATTAATGC AAGCTCTGTT GCTCATTGAT CGTGAAAAAC TAGACGACAA AAAAATGGTT
GGCTCTTGGG CCGGTGCCAT GGGGCACACA CAGTTTATGC CCTCTGCTTA TATGAAATAC
GCAGTTGACG GAGATAAAGA CGGCCAAATC AATCTTTGGG ACAGCGAGCA AGATGCGCTG
GCTTCGGCGG CTAACTTTTT GAAAAATTTA GGTTGGCAAT CAGGTTACAA ATGGGGCAGA
GAGGTGAGCC TGCCTGACTC ATTCGATTAT ACCTTAGCGG GCAAGAATGA TCCCAAAGCG
CTTTCTGTAT GGAACGGCGC TGGCGTCACC CGTACTGACG GCCATGCCAT CGGTAACGCT
GATATCAAAG GTGCGCTTCT GGTGCCTGCG GGTCATGCAG GGCCGGCATT TTTAGCCTAT
AAAAACTTTA ATGTAATATT GCGCTGGAAT AACTCAGAGT ATTACGGCAT CGCTGTGGGG
CACTTAGCGG ATCGTATTGC TGGTTTGAGT ACCTTGTCTA AAACTCTGCC TGAGCTGCCG
GATTACACGG TAGATGAAAT GCGTAAGTTA CAGGATAAGC TCAATGGTTT GGGCTTTGAT
GTGGGCAAGG CCGACGGTAT TTTGGGACCG GGTACACGAA GCGGTATTCG CCAATTTCAA
TTATCAAAAG ACATGATTGC AGATGGTTAC CCAGCACGTG ACGTGTTCGA TGCCTTAATG
GAGCAGCCTC TGCCAAGCAA CTCATAA
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| Protein sequence | MQTALKKLSA IVCCSLLSGI SVAAQQDATD MNVLGDQEVV SEAQEVASPQ ALFAQCVVDL
QGQAKTAGVS KRVTDEVLGG ARYKEKIISL DRNQPEFVQT FTDYFEKRVN TWRIEKGQQM
MAKHRAFLGE LNKEYGVPAQ YLLAFWGLET NFGSYKGKSP VIDSLVTLAC DNRRSRYFSS
ELMQALLLID REKLDDKKMV GSWAGAMGHT QFMPSAYMKY AVDGDKDGQI NLWDSEQDAL
ASAANFLKNL GWQSGYKWGR EVSLPDSFDY TLAGKNDPKA LSVWNGAGVT RTDGHAIGNA
DIKGALLVPA GHAGPAFLAY KNFNVILRWN NSEYYGIAVG HLADRIAGLS TLSKTLPELP
DYTVDEMRKL QDKLNGLGFD VGKADGILGP GTRSGIRQFQ LSKDMIADGY PARDVFDALM
EQPLPSNS
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