| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3428 |
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| Symbol | |
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| ID | 4175205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4107334 |
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| End bp | 4109946 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056459 |
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| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
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| Protein accession | YP_662988 |
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| Protein GI | 109899733 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1049] Aconitase B |
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| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0210956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGAAG CATATCGTAA ACATGTTGAA GAACGTTCTG CCGAAGGTAT CCCACCTAAA
CCATTAAATG CCGAGCAAGT TGCTGGTTTG GTTGAGTTAT TAAAAGCGCC GCCTGCAGGC
GAGGGTGACT TTTTACTTGA GTTGTTATCA GAGCGTGTTC CACCGGGCGT AGATGAAGCG
GCTTATGTTA AAGCTGGTTT CTTAAATGCT ATCGTTATCG GTGAAGCATC ATCTCCTTTG
ATCAGCAAAG ACGCTGCTAT CCAATTGTTG GGTAACATGC ACGGTGGTTA CAACATCGTG
ACGCTAGTTG ATGCACTTGA TAACAATGAT TTGGCTGAGC TTGCTGCTGA AGAATTGAAG
CACACTTTGC TGATGTTTGA TGCTTTCCAT GACGTGGAAG AAAAAGCCCG CGCAGGAAAC
GCATTCGCCA AAGACGTATT ACAATCTTGG GCTGACGCCG AGTGGTTCAC TTCACGCCCT
GAAATGCCTG AGAAAATCAC TTACTCAGTA TTCAAAGTGA CCGGTGAAAC AAACACCGAT
GATTTATCAC CTGCACCTGA TGCATGGTCA CGTCCTGATA TTCCATTGCA CGCACGTGCA
GCGTATAAGA TGACCCGTGA CGGCTTAACG CCTGAAGTAC ATGGAGAAAT TGGACCACTT
AAGCAAATCG ACGAAATTAA AGCAAAAGGT CACCCTGTTG CGTTCGTGGG TGACGTTGTA
GGTACCGGTT CATCACGTAA GTCAGCGACT AATTCAGTCC TTTGGTTCTT CGGTGAAGAC
TTACCTGGCG TACCAAACAA ACGTGGCGGC GGTGTATGTA TCGGCGGCAA AGTTGCGCCA
ATTTTCTACA ACACCATGGA AGATGCTGGT GCGTTAGTAT TTGAAGCTGA CGTAGACAAT
ATGAACATGG GCGACGTGAT TGACATCTTC CCACTTGAAG GTCGTATTAC TAACGCTGAA
ACAGGCGCTG AACTGGCTAA ATATGAGTAT AAGTCTGACG TATTGCTAGA CGAAGTACGC
GCTGGTGGCC GTATTAACTT AATCATTGGT CGTGGTTTGA CCGAAAAAGC GCGCGAGTCT
TTAGGCCTTG GTGCTTCTGA CTTGTTCCGT AAGCCAGACC AACCCGCTGA TACTGGCAAA
GGGTATACCT TAGCTCAGAA GATGGTGGGT AAAGCATGTG GTGTTGAGGG TATTCGCCCA
GGCACTTACT GCGAGCCTAA AATGACTACT GTGGGTTCAC AAGATACCAC TGGACCAATG
ACCCGTGATG AGCTTAAAGA TCTAGCCTGT TTAGGTTTCT CTGCAGATTT AACCATGCAG
TCGTTCTGTC ACACAGCGGC GTACCCTAAA CCAGTTGATA TTGATACTCA GCATACATTG
CCTGATTTCA TTATGAACCG TGGCGGTGTC TCACTTCGCC CAGGTGACGG TATTATCCAC
TCTTGGTTAA ACCGCATGTT ATTGCCTGAT ACCGTGGGTA CTGGTGGTGA TTCTCATACG
CGTTTCCCAA TGGGTATTTC ATTCCCTGCA GGCTCTGGTT TGGTTGCATT CGCAGCTGCA
ACAGGCGTAA TGCCGCTTGA TATGCCTGAG TCGGTATTGG TGCGCTTTAA AGGTAAAATG
AAGCCAGGTA TCACGTTGCG TGATTTGGTG CATGCCATTC CATTGTACGG TATCAAGCAA
GGTCTTTTGA CTGTAGCTAA GAAAGGTAAA GTCAATGCTT TCTCTGGTCG TATTCTTGAA
ATAGAAGGTT TGAACGATTT GACCGTTGAG CAAGCGTTTG AATTGTCAGA TGCCTCTGCA
GAGCGTTCAG CAGCAGGTTG TACTATTAAG TTGTCTGAAG CGTCTATCGC AGAGTACCTA
ACGTCTAACA TCACTATGTT ACGTTGGATG ATCAACGAAG GTTACGGCGA CCCTCGTACG
CTTGAGCGTC GTGCTCGTAA AATGGAAGAG TGGTTGGCTA ACCCAGAGCT AATGCAAGCG
GATAAAGACG CTGAGTACGT TGAAACCATT GAGATTGACC TTGATGATAT CAACGAACCT
ATTCTTTGTT GCCCGAACGA TCCAGATGAT GCGAAAACTT TGTCTGACGT TGCTGGCGAG
AAAATTGATG AAGTGTTCAT CGGTTCTTGT ATGACGAATA TTGGTCACTT CCGTGCTGCA
GGTAAACTAC TTGAGCAATA CAACAAGACC TTGCCAACGC GTTTGTGGAT CTCTCCACCG
ACTAAGATGG ACAAAGCCGT ATTGATGGAA GAAGGCTACT ACAACATCTA CGGTCGTGTG
GGTGTGCGTA CTGAAATGCC TGGTTGTTCA TTGTGTATGG GTAACCAAGC ACGCGTATTA
GCTAACTCAA CAGTATTGTC TACTTCTACT CGTAACTTCC CTAACCGTTT AGGTGATGGT
GCTGATGTTT ACTTGTGTTC TGCTGAACTT GCGGCTGTTG GTGCGATTGT TGGTCGTATC
CCTACTACAG CTGAGTACAT GGAGTATGCG AACAAGATCG AGTCTATGTC TGGTGATGTT
TTCCGTTACT TGAACTTCGA CCGTATCGAT GAGTTCAAGC AAGCAGAAGC TGCTGCGAAA
GAGAAGATTA TTCCTGCTCT TAACATTGCT TAA
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| Protein sequence | MLEAYRKHVE ERSAEGIPPK PLNAEQVAGL VELLKAPPAG EGDFLLELLS ERVPPGVDEA
AYVKAGFLNA IVIGEASSPL ISKDAAIQLL GNMHGGYNIV TLVDALDNND LAELAAEELK
HTLLMFDAFH DVEEKARAGN AFAKDVLQSW ADAEWFTSRP EMPEKITYSV FKVTGETNTD
DLSPAPDAWS RPDIPLHARA AYKMTRDGLT PEVHGEIGPL KQIDEIKAKG HPVAFVGDVV
GTGSSRKSAT NSVLWFFGED LPGVPNKRGG GVCIGGKVAP IFYNTMEDAG ALVFEADVDN
MNMGDVIDIF PLEGRITNAE TGAELAKYEY KSDVLLDEVR AGGRINLIIG RGLTEKARES
LGLGASDLFR KPDQPADTGK GYTLAQKMVG KACGVEGIRP GTYCEPKMTT VGSQDTTGPM
TRDELKDLAC LGFSADLTMQ SFCHTAAYPK PVDIDTQHTL PDFIMNRGGV SLRPGDGIIH
SWLNRMLLPD TVGTGGDSHT RFPMGISFPA GSGLVAFAAA TGVMPLDMPE SVLVRFKGKM
KPGITLRDLV HAIPLYGIKQ GLLTVAKKGK VNAFSGRILE IEGLNDLTVE QAFELSDASA
ERSAAGCTIK LSEASIAEYL TSNITMLRWM INEGYGDPRT LERRARKMEE WLANPELMQA
DKDAEYVETI EIDLDDINEP ILCCPNDPDD AKTLSDVAGE KIDEVFIGSC MTNIGHFRAA
GKLLEQYNKT LPTRLWISPP TKMDKAVLME EGYYNIYGRV GVRTEMPGCS LCMGNQARVL
ANSTVLSTST RNFPNRLGDG ADVYLCSAEL AAVGAIVGRI PTTAEYMEYA NKIESMSGDV
FRYLNFDRID EFKQAEAAAK EKIIPALNIA
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