| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3426 |
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| Symbol | |
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| ID | 4175203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4104915 |
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| End bp | 4106477 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056457 |
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| Product | amidase |
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| Protein accession | YP_662986 |
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| Protein GI | 109899731 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000155871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGAT GCAAAACCAT CAGCAGTTCA TTAACGAGCG GGGTCATCAT TGCTTTGCTC
GCAACCAATA GTTTTGCTGC ACGAGCCAGT GAAACCATCG CTAGGCCGTT ACATGAACTC
ACCCTCAATG AAACACAAAC ATTATTGCGT AACAACACCA TCACCGTCAC CCAATTGAGT
GATTACTATT TACAGCGAAT CGAGAAATTC GACGATAACG GCCCGACACT CAATGCCATC
GTCACGCTTA ATCAGCAGCT CGCTGAACAG GTGGCAGCGT TAGATATGAA ACTTAAGAGT
GACGCGCCAA TGGGCATACT ATTCGGCGCC ATGGTGCTAC TCAAAGACAA TATTGACGCC
ACAGGTATGC CAAACACTGC AGGGTCTTGG CTGATGCGAG AACACGTCCC TAGTAAAGAC
GCCTACTTGG TTGAAAAGTT AAAAGCACAG GACGCGATTA TTCTGGGTAA AACCAATTTG
TCTGAATGGG CAAACTTTCG CTCCACTATG TCATCAAGCG GCTGGAGTAG TTTGCACGGG
CAAACCCTCA ACCCTCATGA TGTAACGCGC TCTCCGTGTG GCTCTAGTTC AGGATCAGGT
GTGGCTGTCG CCGCAGATTT TACGTTATTA GCGGTAGGTA CAGAAACAGA TGGCTCCGTT
ACCTGCCCTG CTGCTGTTAA CGGTATTGTG GGCATCAAAC CCACACTAGG CCTTATTAGC
CGCAGCGGCA TCATTCCCAT CGCCCACTCA CAAGACACAG CAGGCCCAAT GGCACGCTCG
GTTGCTGATG CGGTCGTTAT GCTTGAAGCC ATGATGGGTG AAGACAAGAA CGATGCGAGC
AGCATTGCCC CTGTACGCTT AGTTGAGCAT TTAAAAGCCG ACGGACTTAA AGGCAAGCGG
ATAGGCGTAG TGCGCAACAT GATGGGCTAT CATCCACAAC TTGACGACGT CTTTGAAGCT
CAGTTATCTA TATTAGAAAA AGCGGGCGCT ATCATCATAG ACAATGCCGA TATCGACGAT
AAAGGCAGCT GGAATGAAGA CGAGTACAGC GTGTTGCTGG CTGAGTTTAA AGCGGATTTA
AATCACTATT TAACAAAGAG CAATGCACCA ATAAAAAGCT TACAAGAAGC GATAGACAAA
AATGAAGAAG CAAAAGAGCG CACTATGCCT ATCTTTGGAC AGGAGATATT CATTAGCGCC
CAAGAAGCGC CTGAGTTAAC GGATAAACGC TACCTCGATG CGTTACACAG CGCTAAACAA
AAAGCAGGCA AAGACGGCAT AGATGCCACA CTCGCAAAAT ACAATGTAGA TCTACTGATT
GCTCCCACAA CGGCACCTGC GTGGAAAATA GACCATATCG ATGGTGATCA CTTTCTTGGC
TCAGCCAGCG GCGCGGCGGC AGTCGCCGGC TACCCGCACA TTACTGTTCC AATGGGAGAA
GTGTACGGCA TGCCTGTTAA TATGAGCTTT ATTGGTGGAG CAAAGAGTGA AGGTTTGCTG
ATTGAGGCGG CTTATGGGTT TGAGCAAGCA ACTCATGCGC GTATCACTCC GCTGTTGTTT
TAG
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| Protein sequence | MLRCKTISSS LTSGVIIALL ATNSFAARAS ETIARPLHEL TLNETQTLLR NNTITVTQLS
DYYLQRIEKF DDNGPTLNAI VTLNQQLAEQ VAALDMKLKS DAPMGILFGA MVLLKDNIDA
TGMPNTAGSW LMREHVPSKD AYLVEKLKAQ DAIILGKTNL SEWANFRSTM SSSGWSSLHG
QTLNPHDVTR SPCGSSSGSG VAVAADFTLL AVGTETDGSV TCPAAVNGIV GIKPTLGLIS
RSGIIPIAHS QDTAGPMARS VADAVVMLEA MMGEDKNDAS SIAPVRLVEH LKADGLKGKR
IGVVRNMMGY HPQLDDVFEA QLSILEKAGA IIIDNADIDD KGSWNEDEYS VLLAEFKADL
NHYLTKSNAP IKSLQEAIDK NEEAKERTMP IFGQEIFISA QEAPELTDKR YLDALHSAKQ
KAGKDGIDAT LAKYNVDLLI APTTAPAWKI DHIDGDHFLG SASGAAAVAG YPHITVPMGE
VYGMPVNMSF IGGAKSEGLL IEAAYGFEQA THARITPLLF
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