| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3419 |
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| Symbol | |
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| ID | 4175196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4096514 |
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| End bp | 4097809 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056450 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_662979 |
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| Protein GI | 109899724 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0567862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA CTGTAGTCAC TTTTGCCCTT TTGGCATTTA TCTCGTTTAA CACGTTCGCC
AAGCAAGTCC GCTTGGACAA CGTAGCAGTC ATTGTCGATC AAGGCGTGGT TCTTGAAAGC
CAAATTGAAG AATTAGTTAA TACCGTAAAA CGTAACGCAT TAACCAACAA TCAAACCTTA
CCCTCAGATC GCGTTTTGCG CACCCAAGCG ATTGAGCGCT TGATTGTGGA TAGTTTGCAA
AATCAAATGG CTGAGCGTAT GGGCATTCAA ATTAGCGACC CGCAATTAGA TCAAACCATA
GACAACATCG CCAGAGAAGA CGGCACAACA GTTGAAGACT TGCGTAAAAA CCTTGCCTCT
GAAGGGGTCA GCTTTGAGGT ATATCGTGAG CAAGTGCGCA AAGAATTGGT CACTGGCGAA
GTGCGCCGCG CCAACGTGCG TCGCCGCATA TACATTACGC CTCAAGAAAT AAGCAACTTA
GTGACGCTTA TCGATGAACA AGGCGGACAA CAAGCTGAGT ATCATTTAGG TCATATTTTG
ATTGGTTTTC CACCTGAGCC AACTGACGAA GACGTCAGTA AAGCCAAAGA CACAGCAGAG
AAAGTATTAG AACTATTAAA CAACGGCTCT GAATTTGCCA AAATCGCTAC GGCTTCTTCT
TCTGGCTCTA AAGCGCTTGA AGGCGGTGAT TTAGGTTGGA TGAACATTAA CTCTATGCCA
ACACTCTTTG CAGAGGCAGT ACAAGGCACC AGTAAAGATG ATTTAATCGG CCCTATCCGC
AGTGGTGCAG GTTTTCACGT GTTGAAAATT ATTGATTTTC GTGGCATTGA AAAAGTCGAA
GTTGCAGAGC TCAAGTCTCG TCACATTTTG ATCAAACCCT CGGTTATTTT AAGCGATGAA
AAAGCAGAAA AGATGCTGAC CGAATTTAGA AAAGAACTGT TGGCAGGTGA AGCAGACTTC
GCTGAATTAG CTAAAGAGCA CTCAGCTGAT CCTGGTTCAG CTTTGCGCGG CGGTGATTTA
GGTTGGGCTG ACCCTAACGT TTATGTACCG GCCTTCAGGG ATACATTGCA GAGCTTAGAA
GTAGGCGAAA TCAGCCAACC TGTTCGCTCT ACTCACGGCT GGCATTTAAT GCAATTGATG
GATAAACGTG TACAAGACGC CACAGAAAAA CGCAAAGAAG ACAAAGCATA TCAGTTGTTG
TTCCAGCGTA AGTTTGCTGA AGAAACTGAA GCATGGTTGA AAGAAATGCG TGACAGCGCT
TATGTCGAAT TACTTGATGA AAAAGACAAT AGTTAA
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| Protein sequence | MKLTVVTFAL LAFISFNTFA KQVRLDNVAV IVDQGVVLES QIEELVNTVK RNALTNNQTL
PSDRVLRTQA IERLIVDSLQ NQMAERMGIQ ISDPQLDQTI DNIAREDGTT VEDLRKNLAS
EGVSFEVYRE QVRKELVTGE VRRANVRRRI YITPQEISNL VTLIDEQGGQ QAEYHLGHIL
IGFPPEPTDE DVSKAKDTAE KVLELLNNGS EFAKIATASS SGSKALEGGD LGWMNINSMP
TLFAEAVQGT SKDDLIGPIR SGAGFHVLKI IDFRGIEKVE VAELKSRHIL IKPSVILSDE
KAEKMLTEFR KELLAGEADF AELAKEHSAD PGSALRGGDL GWADPNVYVP AFRDTLQSLE
VGEISQPVRS THGWHLMQLM DKRVQDATEK RKEDKAYQLL FQRKFAEETE AWLKEMRDSA
YVELLDEKDN S
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