Gene Patl_3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3415 
SymboldjlA 
ID4175192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4091328 
End bp4092182 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content45% 
IMG OID638056446 
ProductDna-J like membrane chaperone protein 
Protein accessionYP_662975 
Protein GI109899720 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.258634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGCA AGATTTTAGG TACCATTTTT GGTTTTATGT TTGGGCGGAT CCCCGGTGCC 
ATATTGGGTT TTATTGTTGG GCATATGTTC GACAAAGGCT ATAGCCAAGA CTTCAATCAA
ATGGGCGGCT TCAGTGGTTT TTTTACCAGC CAAGATGACT TTAAAAAGCA GGCAATCTTT
TTTCATGCCC TGTTTTCAGT CATGGGACAC ATTGCCAAAG CAGACGGTAA AGTCAGCGAT
GTAGAGATCA AAATGGCCAG CGCCTTGATG GATCAAATGG GGCTGGAGGG AGATACCCGT
AAAGAAGCTC AGCAGGCCTT TCGCGAAGGT AAAGAAGCAG ACTTCGCCCT AAAAGACATC
ATTGTTGAAT TGAAAGAGTC TTGCCATGGG CGCAGAGACA TACTGCAAGT CTTTTTAGAG
ATTTTGATCC AAGCAGCCTA CGTTGACGGT AAGCTCGATA AAGCAGAACA AAAAGTCCTT
GAAACTGCAG CTTTGCATCT TGGGTTCAAA CAAAACGAGC TATTGTATTT ACTCTCTGTT
TACGAAGCGG AAATACGTTT TCGTCAGCGT GGTGGTCAGC GAGATGGGCG ATCGTCACAC
AGAGCACATC AGGGCAGCCA GTCGACTTAT TCTACTCAGC AATCGTTGAA TGATGCTTAT
CAAATATTGG GCGTGAGTGA GTCGGATGAT GATAAAGCAG TTAAAAAAGC CTATCGCAAG
CTTATGAGCG AAAACCACCC TGACAAACTG GTTTCCAAAG GCTTGCCGAA GCAGGCCTTA
GAACTAGCAA AGAACAAGGC GCAAGATATA CAAGCGGCGT ATGAAATGAT CAAAGAAAAG
CGCGGCATGC GCTGA
 
Protein sequence
MIGKILGTIF GFMFGRIPGA ILGFIVGHMF DKGYSQDFNQ MGGFSGFFTS QDDFKKQAIF 
FHALFSVMGH IAKADGKVSD VEIKMASALM DQMGLEGDTR KEAQQAFREG KEADFALKDI
IVELKESCHG RRDILQVFLE ILIQAAYVDG KLDKAEQKVL ETAALHLGFK QNELLYLLSV
YEAEIRFRQR GGQRDGRSSH RAHQGSQSTY STQQSLNDAY QILGVSESDD DKAVKKAYRK
LMSENHPDKL VSKGLPKQAL ELAKNKAQDI QAAYEMIKEK RGMR