Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3415 |
Symbol | djlA |
ID | 4175192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4091328 |
End bp | 4092182 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056446 |
Product | Dna-J like membrane chaperone protein |
Protein accession | YP_662975 |
Protein GI | 109899720 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.258634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGGCA AGATTTTAGG TACCATTTTT GGTTTTATGT TTGGGCGGAT CCCCGGTGCC ATATTGGGTT TTATTGTTGG GCATATGTTC GACAAAGGCT ATAGCCAAGA CTTCAATCAA ATGGGCGGCT TCAGTGGTTT TTTTACCAGC CAAGATGACT TTAAAAAGCA GGCAATCTTT TTTCATGCCC TGTTTTCAGT CATGGGACAC ATTGCCAAAG CAGACGGTAA AGTCAGCGAT GTAGAGATCA AAATGGCCAG CGCCTTGATG GATCAAATGG GGCTGGAGGG AGATACCCGT AAAGAAGCTC AGCAGGCCTT TCGCGAAGGT AAAGAAGCAG ACTTCGCCCT AAAAGACATC ATTGTTGAAT TGAAAGAGTC TTGCCATGGG CGCAGAGACA TACTGCAAGT CTTTTTAGAG ATTTTGATCC AAGCAGCCTA CGTTGACGGT AAGCTCGATA AAGCAGAACA AAAAGTCCTT GAAACTGCAG CTTTGCATCT TGGGTTCAAA CAAAACGAGC TATTGTATTT ACTCTCTGTT TACGAAGCGG AAATACGTTT TCGTCAGCGT GGTGGTCAGC GAGATGGGCG ATCGTCACAC AGAGCACATC AGGGCAGCCA GTCGACTTAT TCTACTCAGC AATCGTTGAA TGATGCTTAT CAAATATTGG GCGTGAGTGA GTCGGATGAT GATAAAGCAG TTAAAAAAGC CTATCGCAAG CTTATGAGCG AAAACCACCC TGACAAACTG GTTTCCAAAG GCTTGCCGAA GCAGGCCTTA GAACTAGCAA AGAACAAGGC GCAAGATATA CAAGCGGCGT ATGAAATGAT CAAAGAAAAG CGCGGCATGC GCTGA
|
Protein sequence | MIGKILGTIF GFMFGRIPGA ILGFIVGHMF DKGYSQDFNQ MGGFSGFFTS QDDFKKQAIF FHALFSVMGH IAKADGKVSD VEIKMASALM DQMGLEGDTR KEAQQAFREG KEADFALKDI IVELKESCHG RRDILQVFLE ILIQAAYVDG KLDKAEQKVL ETAALHLGFK QNELLYLLSV YEAEIRFRQR GGQRDGRSSH RAHQGSQSTY STQQSLNDAY QILGVSESDD DKAVKKAYRK LMSENHPDKL VSKGLPKQAL ELAKNKAQDI QAAYEMIKEK RGMR
|
| |