| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3412 |
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| Symbol | |
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| ID | 4175189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4086438 |
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| End bp | 4087853 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056443 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_662972 |
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| Protein GI | 109899717 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA CCCTTTTCTG GCGTCTTTGC GCATTTATTG CGTTGGGCAC AGTGTTACTT
TTTTGGGCAT TGAGTTGGTT AACAAACCAC ACTGAAACCA GCATGAGTTT CATCGCGCCT
GAGCATCAAC AACAGCTACT TGAATATGGT AAAGAGGCAG AAGAAATTTT ACGCCGCGAC
GGTGAAGCGG CCTTAGCAAG TTGGCTACGC GCGTTGCAGC AAAAAGAGCA TACCTGGGCT
GCTGTGGTGC GAACAAATAT CACCCCTTTT GCTGGTTCAA CCATAGAAAG CCAGTACCTT
GATCGGTTCC AAATGGGGCG AAGCGTTGAG TGGAAAATTC ACCTGTACTT TGAAGACAAC
CCCACCATGG AGATCCCCTT TTCAGATGCC TCAAGCCACT TTTTGATTCG ACTCCCACAA
CGCATGCGCC CTGGGGCATT TCTGATTTAC GCAAAAGTCA TTTTACAAAT TGCTCTACCC
TTACTATTAC TCAGCCTTTT AAGCTTTGTA CTTTATCAAC ATGTAATGTC ACCGCTACGA
AAATTAGAAA ATGCCACTAA GGCGTTCAGT AGCGGAGAGC TCGATGTAAG AGTCTCACCT
TATTTATCCC ATCGAGACGA CGAGTTAACA CGCCTTGCTG CCACATTCGA TCATATGGCA
CAGCGCATAA GTAAGCTTAT TTACAATCAA AGGCAGTTGC TCGCTGACTT ATCCCATGAA
TTACGCACTC CTTTGACCCG AATCGACATG GCGGTGGATT TTGTAGAGCA AAATATAAAC
CCCAAACAAG CCTTAGAACG CTTAAGATAC GAAGCAGCTA CCATGCGCAA TTTGGTAGAG
GACACGCTCA CATTAGCTTG GCTGAATAAT GAATCGCCAC GACTCGACAC GGATGATTTT
GACTTAGTCG AGTTATTAGA AGTGATTTGT GAAGATGCTC GCTTTGAGTA TCCGGATCGC
CTGTTAACAA CAGACTTACC CGCGCAAAGC AAAATGTCCC ACAGTAGCCA AACAGCCTTA
GGCCAAGCTA TCGAAAACAT CATACGCAAT GCTTTGCGTT ACACGCCAAA AGACAGCGAG
GTAAAGGTCT CCTTGAGCCA GCGTGACGAC GGCTACCTCT TGATCGTTAG AGATCAAGGC
CCAGGTGTCC CCCAAAGCAT GTTGTCAGAT ATATTTAAGC CATTTTTCCG GGTCGATAAA
GCAAGATCGG TAGATACTCC ACCAGATAGA ACTGTCAACC CTAGTGGATT CGGCCTAGGA
CTGGCGTTAG CCCACAGACA GATTGCAGCA GTAGGCGGTA GCATAAAAGC CTCAAACTAT
TACAATAAAA ACGACGGTAA CGAACAGGGC TCGCCACTGG GCTTAGAAAT CAGCGTTGAG
CTTCCTTGCT CAAGCTCTTT TGACGAGTCA CCTTGA
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| Protein sequence | MKNTLFWRLC AFIALGTVLL FWALSWLTNH TETSMSFIAP EHQQQLLEYG KEAEEILRRD
GEAALASWLR ALQQKEHTWA AVVRTNITPF AGSTIESQYL DRFQMGRSVE WKIHLYFEDN
PTMEIPFSDA SSHFLIRLPQ RMRPGAFLIY AKVILQIALP LLLLSLLSFV LYQHVMSPLR
KLENATKAFS SGELDVRVSP YLSHRDDELT RLAATFDHMA QRISKLIYNQ RQLLADLSHE
LRTPLTRIDM AVDFVEQNIN PKQALERLRY EAATMRNLVE DTLTLAWLNN ESPRLDTDDF
DLVELLEVIC EDARFEYPDR LLTTDLPAQS KMSHSSQTAL GQAIENIIRN ALRYTPKDSE
VKVSLSQRDD GYLLIVRDQG PGVPQSMLSD IFKPFFRVDK ARSVDTPPDR TVNPSGFGLG
LALAHRQIAA VGGSIKASNY YNKNDGNEQG SPLGLEISVE LPCSSSFDES P
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