| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3411 |
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| Symbol | |
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| ID | 4175188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4085752 |
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| End bp | 4086441 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056442 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_662971 |
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| Protein GI | 109899716 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCTCTC AGCGTATTTT GATTATCGAA GACGACGCCA CCTTAAGTGG TCAAGTCGCA
AGATTACTCG AAGAAAAAGG CTTCAATACC CACCAATGCT TAGACGGGCA GAAGGGATTA
CTCTGTGCAT TACAGGAAAG CTTCGATCTC ATTTTGCTCG ACGTTTTGCT CCCCTCTCTC
AATGGCTTTA ATGTGTTGAA TCAAATACGT CGCAGCAAGC AGACGCCGGT TATGATGATC
ACGGCCTGTG GTGCCGAACA AGAGAGAATC GAAGGCTATC GAAAAGGCGC AGATGATTAC
CTACCCAAGC CGTTTAATTT CACCGAAATG ATGCTGCGCA TTGAAGCATT GCTGCGCCGC
AGTCAACACA GCGTAGAGCC AATCACGAAA ACGACAGAAT TGAAAATTGA TAAACTTCGT
CTTAATCGGA TAAAACAGCA GGTTTTTTTT GCAGATTGTG ACGTTGAACT GACGCCAATC
CAATTCCGAT TACTGTGGGT GTTAATCGAA AACAGAAATG AAATCATGAG CAAGGCATTT
CTCTATCACA GTGTGCTAGA TAGGCCCTTT AGTCGTTATG ACAGAAGTTT AGATATGCAC
TTGAGCCGAG TGCGTAAAAA GTTGGTCGAG GTGGGCATGT CGCCGGAACG CTTGCTGACG
ATGCACGGTA AGGGTTATCG ATTTACATGA
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| Protein sequence | MSSQRILIIE DDATLSGQVA RLLEEKGFNT HQCLDGQKGL LCALQESFDL ILLDVLLPSL
NGFNVLNQIR RSKQTPVMMI TACGAEQERI EGYRKGADDY LPKPFNFTEM MLRIEALLRR
SQHSVEPITK TTELKIDKLR LNRIKQQVFF ADCDVELTPI QFRLLWVLIE NRNEIMSKAF
LYHSVLDRPF SRYDRSLDMH LSRVRKKLVE VGMSPERLLT MHGKGYRFT
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