Gene Patl_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3398 
Symbol 
ID4175175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4072775 
End bp4073119 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content44% 
IMG OID638056429 
ProductArsR family transcriptional regulator 
Protein accessionYP_662958 
Protein GI109899703 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.88548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACCC CTATTTTGTC ACCCTTGTCG TTTTACAAAT GTTTGTCAGA TGACACGCGC 
CTTAAAGCAC TGATGTTGAT CTATCTTGAA AAAGAATTGT GCGTGTGCGA TCTCATTACG
GCGCTAGAGT TGAGCCAGCC TAAAGTGTCA CGCCATCTCG CTGATTTGCG TAAATGTCAT
ATTCTGCTTG ATGAGCGTCG AGGAAAATGG GTGTACTACT CGGTTAACCC TAAATTGCCA
GAATGGGCGA TGAAAGTCCT TGAATTGACC GCACACAACA CAGAAGCCTA TTTGAATGAC
AACATCACCA ATTTGAACAT GGCCAAGCAA AGCGAGTGTT GTTAG
 
Protein sequence
MSTPILSPLS FYKCLSDDTR LKALMLIYLE KELCVCDLIT ALELSQPKVS RHLADLRKCH 
ILLDERRGKW VYYSVNPKLP EWAMKVLELT AHNTEAYLND NITNLNMAKQ SECC