| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3397 |
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| Symbol | |
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| ID | 4175174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4072162 |
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| End bp | 4072686 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056428 |
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| Product | protein tyrosine phosphatase |
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| Protein accession | YP_662957 |
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| Protein GI | 109899702 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTT GTTTGAATGA TGTGTTTTAC CCTAAAAGCA AAGCGAGGAT CACCTTGAAA
GTCTTATTTA TATGTACCCA CAACCGTTGC CGTAGCATTT TATCAGAAGC GATCACTAAC
CATGCTAGCC AAGGCAAGAT TGAGGCGCAA AGCGCTGGCA GCCAACCGGT AGGTGAGGTA
CACCCATTAT CAATTAAATA CTTACAAGAA GCGGGTATCA GTACCGAAGG ATTGATTAGT
CAATCATGGG ACGAGTTTGA AGATTTTGCT CCTGATGTGG TGATCACCGT TTGTGACAAC
GCAGCGGGCG AGACCTGCCC GCTTTGGTTT GGCAAAAGTG TCAAAGTACA CTGGGGCTTA
GCTGATCCGT CTAAATTATC CGGTAGCGAA GATGAAATAG CGCAAGCATT TCGCGCCACC
ATTGATGAAA TTACTCAGCG CGTAAATGCC ATGCTCAATG TCGATGTTGA TACCCAAGAC
CAAGAAGCGT TACGCGAAGC ATTTCAAGCG TTGGGAGCTC AGTAA
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| Protein sequence | MAFCLNDVFY PKSKARITLK VLFICTHNRC RSILSEAITN HASQGKIEAQ SAGSQPVGEV
HPLSIKYLQE AGISTEGLIS QSWDEFEDFA PDVVITVCDN AAGETCPLWF GKSVKVHWGL
ADPSKLSGSE DEIAQAFRAT IDEITQRVNA MLNVDVDTQD QEALREAFQA LGAQ
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