| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3395 |
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| Symbol | |
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| ID | 4175172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4070358 |
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| End bp | 4071413 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056426 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_662955 |
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| Protein GI | 109899700 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
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| TIGRFAM ID | [TIGR00832] arsenical-resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.893949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTAT TCGAACGTTA TTTATCTGTT TGGGTTGCAC TAAGCATTGC CGCCGGGGTT
GTTCTGGGAA GTGTATTTCC TGATCTTTTC GCCGTGGTGG CAGGGCTTGA ATACGCCCAC
GTCAATCTAG TCGTGGCGGT GCTGATCTGG TTGATGATTT ACCCTATGAT GATTCAAATC
GACTTCTCGT CGATCAAAGA CGTGGGGCGC AAACCGAAAG GGATCGTACT GACATTGGTG
ATCAACTGGC TCATTAAGCC ATTTACTATG GCGGCCCTAG GCTGGTTGTT TTTCAAGGGT
GTTTTTGCGG ATTGGGTTGA CCCGCAAACC GCAAATGAAT ATATCGCAGG CATGATTTTA
CTTGGCGTGG CACCGTGTAC GGCTATGGTG TTTGTGTGGA GCCAACTGAC GAAAGGAGAT
GCTAACTACA CCTTGGTTCA GGTGTCGGTA AACGACATTA TCATGATTTT TGCGTTTGCT
CCCATCAGCG CATTACTGCT GGGTATGAGC GATATTCAAG TTCCTTGGGA AACCTTGATT
ATCTCAGTGG TCTTATACGT GTTACTGCCA TTGGTGGCCG GTGCGATGAC CCGCTCTTGG
CTGAATAAAA GTCACAATGA TACCGCTGAT ATTACACAAG GCGCAGCACA AGACGGTGAC
GTACGCATCG CGAAATTTGT TGGCGCGTTA AAGCCTTGGT CAATTATTGG GTTGTTAGCG
ACTGTGGTGC TGCTGTTTGG TTTTCAAGCG CAAACCATAT TAGACAAACC ACAAATGATT
GTGCTGATTG CGATTCCGTT ATTGCTGCAA ACCTACGGTA TTTTTGCCAT TACTTACTAC
GCAGCCAAGC GCATGCGCTT GCCCCACAAT GTGGCAGCGC CAGCGAGTAT GATTGGCTCA
TCTAACTTCT TTGAATTGGC CGTTGCGGTA GCAATATCTT TATTCGGCCT GCATTCCGGG
GCTGCGCTGG CGACCGTGGT GGGGGTGTTG GTAGAAGTTC CTGTGATGCT ATCGTTGGTG
TATTTTGCGA ATCGCACCCG TGAGTGGTTT GCTTGA
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| Protein sequence | MGLFERYLSV WVALSIAAGV VLGSVFPDLF AVVAGLEYAH VNLVVAVLIW LMIYPMMIQI
DFSSIKDVGR KPKGIVLTLV INWLIKPFTM AALGWLFFKG VFADWVDPQT ANEYIAGMIL
LGVAPCTAMV FVWSQLTKGD ANYTLVQVSV NDIIMIFAFA PISALLLGMS DIQVPWETLI
ISVVLYVLLP LVAGAMTRSW LNKSHNDTAD ITQGAAQDGD VRIAKFVGAL KPWSIIGLLA
TVVLLFGFQA QTILDKPQMI VLIAIPLLLQ TYGIFAITYY AAKRMRLPHN VAAPASMIGS
SNFFELAVAV AISLFGLHSG AALATVVGVL VEVPVMLSLV YFANRTREWF A
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