Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3392 |
Symbol | |
ID | 4175169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4067039 |
End bp | 4067896 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638056423 |
Product | protein of unknown function RIO1 |
Protein accession | YP_662952 |
Protein GI | 109899697 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [T] Signal transduction mechanisms |
COG ID | [COG1718] Serine/threonine protein kinase involved in cell cycle control |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAC CTAAAAGAAT ACAACCCCTG GTTGATGACG GCCTCGTTGA TGAGGTGCTT TATCAGCTAA TGAGCGGCAA AGAAGCTACA GTTTATGCTG TGCGCTGTGG TAACGAAATC CGCTGCGCCA AAGTGTATAA AGAAGCGATG AAGCGCAGTT TTAAAAAAGC GGCGCAATAT CAAGAAGGGC GTAAAGTGCG CAACACCCGC CGCGCCCGAG CCATGGAAAA GGGGTCAAAA TTCGGTCGTA AGCAGCAAGA AGACGCTTGG CAGAACACTG AGGTAGATGC CTTATTTACG TTAGCTAAAG CCGGGGTTCG TGTGCCTGAG CCTTACGGCT GTTATGACGG TGTATTGCTA ATGGAGTTGA TCACCGATGA CGAAGGCGAT GTGGCGCCTC GTTTAAATGA TGTGACTATG CCTGCTGAAC AAGCCATAGA AGATCACGCC ATTGTGATGG TGTATGTGAT GCGTATGTTA TTAGCCGGTT TGGTGCATGG TGACTTGTCA GAATTTAATG TTTTGGTCGA TGCTTACGGC CCCGTGATCA TCGATTTGCC CCAAGTGGTT GATGCGGCAG CCAATAACAA TGCGTTTAGC ATGTTACAGC GCGACGTGCG CAATATGACT GAGTACTACG CACAATATGC CCCAGAGCTT AAAAACAGCC ATTACGCCGA AGAAATGTGG GCTTTGTTTG AAGCAGGTGA GCTTGAAGCA GATACCCAGT TAACTGGGCA TTTTGATTTC CCAGATGATG AAGCGGATGT CGATACTGTT TTAGAAGAAA TTAAAGCCGC GTTTGAAGAA GAACAAGAGC GTAAAGCACG CATCGCAGGC CCTAGTGACG AAGATTAG
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Protein sequence | MKIPKRIQPL VDDGLVDEVL YQLMSGKEAT VYAVRCGNEI RCAKVYKEAM KRSFKKAAQY QEGRKVRNTR RARAMEKGSK FGRKQQEDAW QNTEVDALFT LAKAGVRVPE PYGCYDGVLL MELITDDEGD VAPRLNDVTM PAEQAIEDHA IVMVYVMRML LAGLVHGDLS EFNVLVDAYG PVIIDLPQVV DAAANNNAFS MLQRDVRNMT EYYAQYAPEL KNSHYAEEMW ALFEAGELEA DTQLTGHFDF PDDEADVDTV LEEIKAAFEE EQERKARIAG PSDED
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