| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3383 |
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| Symbol | |
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| ID | 4175160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4057660 |
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| End bp | 4058874 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638056414 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_662943 |
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| Protein GI | 109899688 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.160836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGAG CGGTTATCAC CGGGCTAGGC ATTGTTTCTA GTATTGGTAA CAACAAAACT
GAAGTCACGA AATCTCTTAG AGAAGGGCGT TCTGGCATCA CTTATTCTGA ACAATTTGCC
GAAAATGGCA TGCGCAGTCA TGTTTGGGGC AAAGTTGATA TCAACTTAGC TGACCACATT
GACCGTAAAA CATTGCGTTT TATGGGGGAT GCCGCAGGTT ACGCCTATAT TGCGATGCAG
CAAGCTGTTG AAGATTCAGG TTTGACCCCA GAGATGGTAT CAAACGTACG AACGGGCATT
ATTGCGGGAT CTGGCGGTGC GTCTTCTCAA CATCAAGTGG AAGCGGTAGA CATATTGCGC
GAAAAAGGCT TACGCCGCGT AGGGCCATAC ATGGTAACGC GATGCATGGG CAGCACCGTC
TCCGCCTGCT TAGCTACTCC CTTTAAAATT AAAGGCGTTA ACTATTCGAT TAGTTCAGCA
TGCTCCACCA GTGCCCACTG TATTGGTAAC GCCCTAGAGC AAATTCAGTT AGGCAAGCAA
GATATTATTT TTGCTGGTGG CGGTGAAGAG CTGCACTGGA CGCTATCAAT GGAATTTGAC
GCCATGGGCG CACTTTCTAC TAAATACAAC GATGAGCCAA GCAAGGCGTC ACGTACCTAT
GATGCCAACC GTGATGGTTT CGTTGGTGCT GGTGGCGGCG GTATGGTTGT AGTTGAAGAG
CTAGAGCATG CACTGGCACG CGGGGCTAAA ATATACGGCG AAATCGTGGG TTACGGCGCG
ACATCAGACG GCGCCGATAT GGTAGCACCA TCAGGCGAGG GTGCTATTCG TTGCATGCAG
CAAGCGATGA ACGGTATTGA TGAGCCAATT GATTATATTA ATACTCATGG TACCTCTACC
CCAGTGGGCG ATGTCAAAGA GCTATGGGCT ATCGGTGAAG TGTTCGGCGA TAAAGTACCA
CCACTGAGCG CTACAAAAGC GATGACCGGC CATGCACTGG GTGCCGCTGG CGTTAACGAA
GCGATTTACA GCTTGTTGAT GATGGAAAAC GATTTTATTG CGCCTTCTAT CAACATCGAA
ACATTAGATG AAGCGGCGAA CGGGATGGAT GTAGTGACTC AAACCCGTGA CGCTAAACTA
AATACGGTGA TGTCAAACAG CTTCGGCTTT GGCGGTACAA ACTGTACTTT GGTGATGCAG
CGCTACAAAG GCTAG
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| Protein sequence | MRRAVITGLG IVSSIGNNKT EVTKSLREGR SGITYSEQFA ENGMRSHVWG KVDINLADHI
DRKTLRFMGD AAGYAYIAMQ QAVEDSGLTP EMVSNVRTGI IAGSGGASSQ HQVEAVDILR
EKGLRRVGPY MVTRCMGSTV SACLATPFKI KGVNYSISSA CSTSAHCIGN ALEQIQLGKQ
DIIFAGGGEE LHWTLSMEFD AMGALSTKYN DEPSKASRTY DANRDGFVGA GGGGMVVVEE
LEHALARGAK IYGEIVGYGA TSDGADMVAP SGEGAIRCMQ QAMNGIDEPI DYINTHGTST
PVGDVKELWA IGEVFGDKVP PLSATKAMTG HALGAAGVNE AIYSLLMMEN DFIAPSINIE
TLDEAANGMD VVTQTRDAKL NTVMSNSFGF GGTNCTLVMQ RYKG
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