Gene Patl_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3375 
Symbol 
ID4175152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4049602 
End bp4050135 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content48% 
IMG OID638056406 
Producthypothetical protein 
Protein accessionYP_662935 
Protein GI109899680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.774388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGGAAA CTCAATCAGC ACAACATAAT CAAACGGTCA ATAAGGCTGC GCAGGATCTT 
GAATTCGGCG GGTCGCTTAA TCGCGCGTCA AGCCAAGGTG CGAAATTTGC CCTGTTGTTA 
TCGATGCTGC AACAAGACGT ATTGGCTCGC CCCCGCATTG GCGCCCCAAA CGAAGCTGTC 
ACGCAGCAAG CTTATGGCGT TCAATCTGAT TACCCCGAAG CTCCATTGCA AGCAATTGCC 
CAAGACTGGC CGTTAGCGGA TACAACCTCG CAATTACTTC ACAGCGATGG TATTCGCAGT 
GCTCAGCTAT GGTTGGCAAT GCACCCACAA CCTTTATCAT TGCACAATGA TGCTTTTCAT 
ATTGATGAAG ACATTTTCGA GAATTGCGAT ATACATACCC AAAGCCGTTA TGCACAACAT 
GTTGCTGGCA GCCAAGACGC CATGGCAGAC AATGGTTCGG TTAATGAAAT TAAAGTGGAT 
GAGACCGGTA TCTTTGATTT ACTGGAAGAA ATAGGCCTGC AAATGCAGGC CTGA
 
Protein sequence
MQETQSAQHN QTVNKAAQDL EFGGSLNRAS SQGAKFALLL SMLQQDVLAR PRIGAPNEAV 
TQQAYGVQSD YPEAPLQAIA QDWPLADTTS QLLHSDGIRS AQLWLAMHPQ PLSLHNDAFH 
IDEDIFENCD IHTQSRYAQH VAGSQDAMAD NGSVNEIKVD ETGIFDLLEE IGLQMQA