Gene Patl_3370 details

Gene Information

• Locus tag: Patl_3370
• ID: 4175147
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 4043682
• End bp: 4044209
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638056401
• Product: response regulator receiver protein
• Protein accession: YP_662930
• Protein GI: 109899675
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTAGCC TAATACTGAT TGACGATGAT GAGGCATTCT TAACCGTCAT TAAGCGACGA 
TTTCTGCAAA CAGGCTTATT TACCGTCACC ACTCACACCA GTGTTAGCGA AGCCTTACTG 
CAACCTGTTT CACCAACTCA CGGAATATTA CTCGATATGA TGCTCGGCTC CGATTCAGGA 
TTAGACGGCA TCGAGGCATT AAAACGGCAT TTTCATCCTA CCCATCTCAT TATGCTTACT 
GGCTATGCCA GCATAGCGAC TTCTGTGGAG GCCATGCGCC GTGGTGCAAC TGACTACATT 
ACCAAACCGA TTAGCTTTCA AGAGCTTGTC CTGCGCTTCC AAGAAATCCC CGGTTCAAAG 
GAGCCTCCTC AAGCAAAACC TATGACGCCT GCTCAAGTTG AATGGGAACA CATACAGCGC 
ATTTTACTCA GCCACAATGG CAATATTAGT GTGACTGCCC ATGCTCTGGG TATGCACAGA 
AGAACCTTAC AACGAAAGTT GCAGAAATTT TCACCAAGCA AAAGTTAA 

 

Protein sequence

MRSLILIDDD EAFLTVIKRR FLQTGLFTVT THTSVSEALL QPVSPTHGIL LDMMLGSDSG 
LDGIEALKRH FHPTHLIMLT GYASIATSVE AMRRGATDYI TKPISFQELV LRFQEIPGSK 
EPPQAKPMTP AQVEWEHIQR ILLSHNGNIS VTAHALGMHR RTLQRKLQKF SPSKS