| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3364 |
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| Symbol | |
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| ID | 4175141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4036502 |
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| End bp | 4037626 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056395 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_662924 |
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| Protein GI | 109899669 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATTT ATTATGAAGA CAGTCTGCCT TATGCTGCTG AATTTTTTGC AGGGTTAGGT
GACAGCCAGG TTTTTTCCCA CAAAGACGTT AATGGTGAGC TTGTCGCAGA TGCCGACGTG
TTATTGGTGC GATCGACGAC TAAGGTCAAT GCTGAGCTTC TTAAAGCTAA TCAAAACATC
AAATATGTGG GTACTGCTAC CGCAGGCACT AATCATCTCG ATAAAGAGTA CTTGCGCAGC
CGCGGATTAG ATATTCACTC TGCAGCGGGC TGCAATGCCG TAGCCGTTGC CGAATATGTC
CTTAGTGCAT TATTCGTTAT GGCTGAAAAA CTTGATTGGC AGTTAACGAC TAAAACGGTT
GGTATTGTCG GGGCGGGCCA TGTAGGCACT CGATTAACTG AGAAACTGAC AGCGCTGGGT
ATTCGCTACC ATTTGTGCGA TCCCCCGTTG GCCGATGCTG GCGACACCAG AGATTTTGTC
GATATGGATA CCATCATGCA GTGCGATATC ATTAGCTTGC ATGTGCCTTT AATTGAAGGC
GGTCAATACA ATACAGGGCA TATGTTTGAT GCTAAACGTA TTGGGCAATT GCGTAAAGAC
CAGCTTTTGA TTAACGCCTG TCGCGGTGAA GTCATTGATA ATAAAGCGTT GTTAAAGAGT
TTTGAATCAG GGTACAAGCT AAATGTTGTG TTAGATGTGT GGGAAAACGA ACCAGATATC
GACCAAGCGC TCGTACCCTA TATCGCATTA GCTACGGCGC ACATCGCTGG GCACACTGTT
GAGGGAAAGG CGCGCGGTAC TGAAATGCTT TATCAGCAGG TGTGCGAACA ATTTGGCTTT
AATGCGACAA AAAAGCTTAG CGATTATTTG CCGGCACCCC AGCCAAGCAT TATCACGCTT
GATGAAACAT TAAGCGGGCA AGCGCAACTA AGTGCGTTAG TGCTTAGTGT TTACGACATT
CGAAAGGACT CTAAGCAGTT TAAAGAGACC ATTGAACAGC CGGATCAGTT TAGATATATC
CGAAAAAACT ATTCTATTCG AAGAGAATTC GCTGCACTTA GCGTAAATAC TGGAAATTAT
AGCGGATCAG AGGCAATCTA CGCCCTCGGA TTCAACCGTA AATAA
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| Protein sequence | MKIYYEDSLP YAAEFFAGLG DSQVFSHKDV NGELVADADV LLVRSTTKVN AELLKANQNI
KYVGTATAGT NHLDKEYLRS RGLDIHSAAG CNAVAVAEYV LSALFVMAEK LDWQLTTKTV
GIVGAGHVGT RLTEKLTALG IRYHLCDPPL ADAGDTRDFV DMDTIMQCDI ISLHVPLIEG
GQYNTGHMFD AKRIGQLRKD QLLINACRGE VIDNKALLKS FESGYKLNVV LDVWENEPDI
DQALVPYIAL ATAHIAGHTV EGKARGTEML YQQVCEQFGF NATKKLSDYL PAPQPSIITL
DETLSGQAQL SALVLSVYDI RKDSKQFKET IEQPDQFRYI RKNYSIRREF AALSVNTGNY
SGSEAIYALG FNRK
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