| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3351 |
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| Symbol | |
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| ID | 4175128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4016934 |
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| End bp | 4018928 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056382 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_662911 |
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| Protein GI | 109899656 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0659347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATA TAAAAGATGT ATTGGTACCC GATGTGGGTG GCGACGAAGT AGAAGTCATT
GAAGTACTTG TTGCTGTTGG CGACGACGTT GACGCAGAAG CATCCCTTAT CACGGTAGAA
AGCGATAAAG CGAGCATGGA TATCCCTGCC CCTTTCGCTG GTAAAATCAG TGATATTTCG
GTCAAGGTCG GTGACAAAAT CAGCCAAGAC CAACTGATCA TGAAAATGTC CAGTGGTGAC
AGCGCACCCG CAGCTCAAGA GTCTCAAGAG CAAGCCCCTG AGCCTGCTAA GACTGAAGCT
GCCAGCCCTG CGAAAGAAGA AGCACCAGCG GCTTCTTCAG CAGCACAAGT GATTGAAGTG
ACCGTACCCG ACATCGGTGG TGACACCGAT GTTGAGGTCA TTGAAATCCT TGTCGCCGCC
GGCGATAGCA TCGAAGAAGA AACAGGCCTT GTCACCCTTG AAACAGACAA AGCCACTATG
GACGTTCCTT CACCTAAAGC AGGTGTTGTT AAAGAAGTGA AACTCAGTAC TGGTGATAAA
GTATCTGAAG GCTCACTAGT GATTTTGCTT GAAGTCGCAG GCAGTGCGCA AGCTGACTCT
GCACCTCAAG CACAAGCAGC GCCGGCTCAA AAGCAAACTC AAGCCGAAAG TGCCCCTGCA
GCACAAGAAG AACAAACCTC TGGCGAACCT GAAACGATTG AAGTGACTGT ACCGGATATC
GGTGGCGACA CTGATGTCGA TGTCATTGAA GTCTTAGTTG CCGTTGGTGA TGAAATCGAA
GAAGAAACCG GTTTAATCAC ACTTGAAACA GACAAAGCGA CCATGGACGT CCCCGCACCT
AAAGCGGGTG TGGTTAAAGA GCTTAAAATC AACGTTGGTG ATAAGGTTTC AGAAGGTTCA
GTCGTGCTTC TGCTTGAAGT CGCTGGTAGC GCTGTGAAAG CAGCGCCTAA GGCTGCACCT
AAAGCACCTG AGCCACAAGC ATTACAAACA TCAGCGCCTG CGCAACAAGC CCCTAAATCA
GCCCCTGTGC CTCATCATCC TTCAGCGGGT GAGCGCGGTA AAGCAGGGAA AGTACATGCC
TCACCTTCGG TACGTCGTGT AGCTCGTGAA TTTGGTGTTG ATTTAACCCA AGTCAAAGGC
ACTGGCCCTA AAAACCGTGT GTTAAAAGAA GATGTTCAAT CTTACGTTAA GTATGAATTG
TCTCGTCCTA AGATGACCTC AGGTTCTTCG GTTAATGCTG GCGGTGGCGG TTTACAAGTG
CTTGCGCCAC CTAAAGTTGA TTTCAGCAAA TTCGGCGAAA TAGAAGAAAT TCCATTGACT
CGTATCCAGA AGATTTCTGG ACCGAACTTG CATCGCAACT GGGTCACTAT CCCACACGTC
ACTCAGTTTG AAGAAGCTGA TATCACAGAC TTAGAAGCAT TCCGTAAGCA GCAAAATGTG
GTTGCTGAGA AGAAAAAGCT TGGCTTTAAA ATAACGCCAT TGGTCTTCAT GATGAAAGCC
GTAGCGGATG CCCTTCAAGC GTACCCCGTG TTTAATTCTT CTTTGTCTGA ATCAGGTGAA
AGCTTGATCC AGAAGAAGTA TTTCCACGTG GGTATTGCGG TAGAAACACC AAACGGTTTA
GTTGTACCTG TGGTACGTGA TGTTGATAAG AAAGGCATTT ACGAGCTATC GAAAGAATTG
ATGGATATAA GCATCAAGGC GCGAGACGGC AAACTGAAGG CGGCTGACAT GCAAGGTAGT
TGTTTTACCA TTTCCAGCCT AGGCGGAATT GGCGGAACCG CGTTTACCCC TATTGTAAAT
GCGCCAGATG TCGCCATATT AGGTGTGTCT AAAAGTGAAA TGAAGCCGAA ATGGAACGGT
AAAGACTTCG AACCAAGGCT AATGTTGCCT TTATCTTTGT CTTACGATCA CCGAGTCATT
GATGGCGCAG TTGCCGCACG CTTCGCTGTA CACTTGGGCA AAGTCCTAGG TGACTTGCGC
GAAATGTTAC TGTAA
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| Protein sequence | MSDIKDVLVP DVGGDEVEVI EVLVAVGDDV DAEASLITVE SDKASMDIPA PFAGKISDIS
VKVGDKISQD QLIMKMSSGD SAPAAQESQE QAPEPAKTEA ASPAKEEAPA ASSAAQVIEV
TVPDIGGDTD VEVIEILVAA GDSIEEETGL VTLETDKATM DVPSPKAGVV KEVKLSTGDK
VSEGSLVILL EVAGSAQADS APQAQAAPAQ KQTQAESAPA AQEEQTSGEP ETIEVTVPDI
GGDTDVDVIE VLVAVGDEIE EETGLITLET DKATMDVPAP KAGVVKELKI NVGDKVSEGS
VVLLLEVAGS AVKAAPKAAP KAPEPQALQT SAPAQQAPKS APVPHHPSAG ERGKAGKVHA
SPSVRRVARE FGVDLTQVKG TGPKNRVLKE DVQSYVKYEL SRPKMTSGSS VNAGGGGLQV
LAPPKVDFSK FGEIEEIPLT RIQKISGPNL HRNWVTIPHV TQFEEADITD LEAFRKQQNV
VAEKKKLGFK ITPLVFMMKA VADALQAYPV FNSSLSESGE SLIQKKYFHV GIAVETPNGL
VVPVVRDVDK KGIYELSKEL MDISIKARDG KLKAADMQGS CFTISSLGGI GGTAFTPIVN
APDVAILGVS KSEMKPKWNG KDFEPRLMLP LSLSYDHRVI DGAVAARFAV HLGKVLGDLR
EMLL
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