| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3346 |
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| Symbol | |
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| ID | 4175123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4011101 |
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| End bp | 4011577 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638056377 |
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| Product | hypothetical protein |
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| Protein accession | YP_662906 |
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| Protein GI | 109899651 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGATAT TGGCTTGGGC CGCAGGGTTG GGCCTTTTGA CCTTATTGTT TCATAAACAA
CTTGCTCAGC AACTTAATCC TAATACGACG CCACAAAGCC AAACCCGAGG TGAGCGTATC
GAGGTACAAC TGCAGCAAAA TCGATACGGG CATTACGTCA CTAGTGGTTT AATCAATGCT
CAGCCGGTTG TATTTATGTT GGACACCGGC GCGACTAATG TGTCAATCCC CAGCGCGCTC
GGTCCGTCGC TTGGGCTAAC GCCCGGTCGT CAAGCTTGGG TGCAAACAGC CAATGGGCGT
TTACGCGTCT CACAAACCAG TATTGATGAA CTGCAAATTG GCGGTATTGT TTTACGCAAT
GTCACGGCGC ATTTGAATCC CGGTATGATG GGCAATGAGA TATTGCTTGG GATGAGCGCC
TTGAAACAAG TAGAATTCGC GCAAAGAGGC GACCAGCTAA TACTGCGAAG CGATTAA
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| Protein sequence | MLILAWAAGL GLLTLLFHKQ LAQQLNPNTT PQSQTRGERI EVQLQQNRYG HYVTSGLINA
QPVVFMLDTG ATNVSIPSAL GPSLGLTPGR QAWVQTANGR LRVSQTSIDE LQIGGIVLRN
VTAHLNPGMM GNEILLGMSA LKQVEFAQRG DQLILRSD
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