| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3345 |
|---|
| Symbol | |
|---|
| ID | 4175122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 4010211 |
|---|
| End bp | 4011053 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638056376 |
|---|
| Product | nicotinate-nucleotide pyrophosphorylase |
|---|
| Protein accession | YP_662905 |
|---|
| Protein GI | 109899650 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACAAC ACGCAATTCA AGAGGCCGTT AAAGCCGCAT TACTCGAAGA TTTAGGCGGC
CCAGACTGCA CCATGGGCGA CATTACTGCC AACCTCATCC CTGAACCCCA GCAAATCGTG
GTGAACATTA TCACCCGTGA AGATTGTGTG CTTGCGGGTA AGGAATGGGT GAATGCGACA
TTCATGCAGT TGGACGACAA TATCGACATC AATTGGCATG TAGAGGATGC GCAGCACGTT
AAAGCAGATA CCGTATTGTG TCAGATTAGC GGTAACGCCC GGGTGATTTT GACCGGTGAG
CGAACAGCGT TAAACTTCTT ACAAACATTG TCTGGTACTG CCACCGTTGT AGCTGATTAT
GTACAAGCTT TAGGGGACAG TAACACTAAG CTGCTGGATA CCCGCAAAAC CCTTCCAGGC
ATGCGCCTAG CGCAAAAATA TGCCGTGACC TGTGGCGGTG GCAAAAACCA TCGTATCGGT
TTGTTTGATG CATATTTGAT TAAAGAGAAC CACATTTTGG CCTGTGGCTC TATCGCTAAT
GCGATAGGAA AAGCGCGTGA AATGCACCCT GATATTCCTG TTGAGGTGGA AGTAGAAAAC
TTAGAAGAAC TCAAACAGGC ATTAGATGCG AAAGCGGATA TTATTATGCT GGATAATTTC
TCATTACAGG ACACGCGTCA AGCCGTCGCA TTGACCCAAG GTGCGAGTAA ATTGGAAGTG
TCCGGTAATA TCACCAAAGA GCGTATTACT GAACTTGCAC AAGTGGGAGT GGATTACATT
TCAAGTGGTG CACTCACCAA ACATGTGCAA GCCATTGATT TATCATTGCG CGTAGTCGGT
TAA
|
|---|
| Protein sequence | MLQHAIQEAV KAALLEDLGG PDCTMGDITA NLIPEPQQIV VNIITREDCV LAGKEWVNAT
FMQLDDNIDI NWHVEDAQHV KADTVLCQIS GNARVILTGE RTALNFLQTL SGTATVVADY
VQALGDSNTK LLDTRKTLPG MRLAQKYAVT CGGGKNHRIG LFDAYLIKEN HILACGSIAN
AIGKAREMHP DIPVEVEVEN LEELKQALDA KADIIMLDNF SLQDTRQAVA LTQGASKLEV
SGNITKERIT ELAQVGVDYI SSGALTKHVQ AIDLSLRVVG
|
|---|
| |