Gene Patl_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3328 
Symbolpgk 
ID4175105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3991307 
End bp3992482 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content48% 
IMG OID638056359 
Productphosphoglycerate kinase 
Protein accessionYP_662888 
Protein GI109899633 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.465511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATAA TTAACATGAC TGATTTAGAT TTAGCAGGAA AGCGCGTACT TATTCGTCAG 
GATCTGAACG TACCTGTCAA GGGCGGAAAA GTCACTTCCG ATGCGCGTAT TAAGGCGTCT
TTAGGCACAC TTAAACATGC ACTTGAAGCC GGTGCCAAGG TCATGGTTAT GTCTCATTTA
GGTCGCCCCA CAGAAGGTGA GTACGACAGT GCATTCTCAT TGCAGCCCGT GGTTGATTAT
CTTAATGACG TTCTAGAGTG CTCAGTAAGC CTAGCGAGTG ATTATTTAAA CGGTGTTGAT
GTGAAAGCCG GCGAACTGGT CGTTCTTGAA AATGTACGTT TCAACGTAGG CGAAAAGAAA
GACGACGAAG CGCTTTCTAA GCAATACGCC GCGTTATGTG ATGTATACGT AATGGACGCT
TTTGGCACTG CGCACCGTGC ACAAGCCTCA ACTCATGGCG CGGGCAAATT CGCACCTGTT
GCCTGCGCTG GCCCGCTACT GGCGGGTGAA CTAGAAGCAC TAGGTAAAGC ATTGCACAAT
CCGGCGCGTC CAATGCTGGC GATTGTTGGC GGCTCTAAAG TGTCAACCAA GTTAACGGTA
CTTGAATCTT TATCTAATAA AGTGGACCAG CTTATTGTGG GTGGCGGCAT CGCCAATACC
TTTATTGCCG CCACTGGCAA CAACGTGGGT AAATCCTTGT ATGAAGCTGA TTTAATCCCT
GAAGCGAATC GTTTATTAGC GGCGGCAAAA GATGCAGGTG GGAATATCCC TGTGCCTGTT
GATGTTGTCA CTGGCAAGGA GTTCTCAGAG CAAGCACAAG CAACACTCAA GGCCGTTAGT
GACGTAGCAG ACGATGATAT GATTTTTGAT ATCGGGCCAC AGACTGCCAC TGAGCTGGCA
GAGTTGATCA AAAACGCCGG AACAATCGTC TGGAATGGCC CTGTAGGGGT ATTCGAATTT
GACCAATTTG GAGAGGGCAC AAAAGCCATT GCTATGGCAA TTGCACAAAG TAATGCATTT
TCTATTGCTG GCGGTGGTGA TACGTTAGCA GCAGTAGACA AATATGGTAT CGAAGATAAG
ATATCGTATA TCTCTACCGG TGGTGGCGCA TTTTTAGAAT TTTTAGAAGG TAAAGCGCTA
CCGGCTGTGA CTATGTTAGA AGCGCGCGGC GCGTAA
 
Protein sequence
MSIINMTDLD LAGKRVLIRQ DLNVPVKGGK VTSDARIKAS LGTLKHALEA GAKVMVMSHL 
GRPTEGEYDS AFSLQPVVDY LNDVLECSVS LASDYLNGVD VKAGELVVLE NVRFNVGEKK
DDEALSKQYA ALCDVYVMDA FGTAHRAQAS THGAGKFAPV ACAGPLLAGE LEALGKALHN
PARPMLAIVG GSKVSTKLTV LESLSNKVDQ LIVGGGIANT FIAATGNNVG KSLYEADLIP
EANRLLAAAK DAGGNIPVPV DVVTGKEFSE QAQATLKAVS DVADDDMIFD IGPQTATELA
ELIKNAGTIV WNGPVGVFEF DQFGEGTKAI AMAIAQSNAF SIAGGGDTLA AVDKYGIEDK
ISYISTGGGA FLEFLEGKAL PAVTMLEARG A