Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3328 |
Symbol | pgk |
ID | 4175105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3991307 |
End bp | 3992482 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638056359 |
Product | phosphoglycerate kinase |
Protein accession | YP_662888 |
Protein GI | 109899633 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.465511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAATAA TTAACATGAC TGATTTAGAT TTAGCAGGAA AGCGCGTACT TATTCGTCAG GATCTGAACG TACCTGTCAA GGGCGGAAAA GTCACTTCCG ATGCGCGTAT TAAGGCGTCT TTAGGCACAC TTAAACATGC ACTTGAAGCC GGTGCCAAGG TCATGGTTAT GTCTCATTTA GGTCGCCCCA CAGAAGGTGA GTACGACAGT GCATTCTCAT TGCAGCCCGT GGTTGATTAT CTTAATGACG TTCTAGAGTG CTCAGTAAGC CTAGCGAGTG ATTATTTAAA CGGTGTTGAT GTGAAAGCCG GCGAACTGGT CGTTCTTGAA AATGTACGTT TCAACGTAGG CGAAAAGAAA GACGACGAAG CGCTTTCTAA GCAATACGCC GCGTTATGTG ATGTATACGT AATGGACGCT TTTGGCACTG CGCACCGTGC ACAAGCCTCA ACTCATGGCG CGGGCAAATT CGCACCTGTT GCCTGCGCTG GCCCGCTACT GGCGGGTGAA CTAGAAGCAC TAGGTAAAGC ATTGCACAAT CCGGCGCGTC CAATGCTGGC GATTGTTGGC GGCTCTAAAG TGTCAACCAA GTTAACGGTA CTTGAATCTT TATCTAATAA AGTGGACCAG CTTATTGTGG GTGGCGGCAT CGCCAATACC TTTATTGCCG CCACTGGCAA CAACGTGGGT AAATCCTTGT ATGAAGCTGA TTTAATCCCT GAAGCGAATC GTTTATTAGC GGCGGCAAAA GATGCAGGTG GGAATATCCC TGTGCCTGTT GATGTTGTCA CTGGCAAGGA GTTCTCAGAG CAAGCACAAG CAACACTCAA GGCCGTTAGT GACGTAGCAG ACGATGATAT GATTTTTGAT ATCGGGCCAC AGACTGCCAC TGAGCTGGCA GAGTTGATCA AAAACGCCGG AACAATCGTC TGGAATGGCC CTGTAGGGGT ATTCGAATTT GACCAATTTG GAGAGGGCAC AAAAGCCATT GCTATGGCAA TTGCACAAAG TAATGCATTT TCTATTGCTG GCGGTGGTGA TACGTTAGCA GCAGTAGACA AATATGGTAT CGAAGATAAG ATATCGTATA TCTCTACCGG TGGTGGCGCA TTTTTAGAAT TTTTAGAAGG TAAAGCGCTA CCGGCTGTGA CTATGTTAGA AGCGCGCGGC GCGTAA
|
Protein sequence | MSIINMTDLD LAGKRVLIRQ DLNVPVKGGK VTSDARIKAS LGTLKHALEA GAKVMVMSHL GRPTEGEYDS AFSLQPVVDY LNDVLECSVS LASDYLNGVD VKAGELVVLE NVRFNVGEKK DDEALSKQYA ALCDVYVMDA FGTAHRAQAS THGAGKFAPV ACAGPLLAGE LEALGKALHN PARPMLAIVG GSKVSTKLTV LESLSNKVDQ LIVGGGIANT FIAATGNNVG KSLYEADLIP EANRLLAAAK DAGGNIPVPV DVVTGKEFSE QAQATLKAVS DVADDDMIFD IGPQTATELA ELIKNAGTIV WNGPVGVFEF DQFGEGTKAI AMAIAQSNAF SIAGGGDTLA AVDKYGIEDK ISYISTGGGA FLEFLEGKAL PAVTMLEARG A
|
| |