| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3318 |
|---|
| Symbol | |
|---|
| ID | 4175095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3980797 |
|---|
| End bp | 3981882 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638056349 |
|---|
| Product | phosphate binding protein, putative |
|---|
| Protein accession | YP_662878 |
|---|
| Protein GI | 109899623 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAA GTACTTTATC GATAATTTGT GCATGTGTGT GGACGCTAAT CAGCGCTCCA
GCAAACGCTA TGCGCGACTA TATCGATGTT GTCGGCTCTT CAACTGTGTA TGCCTTCTCC
ACGGTCGTGG CTGAACGTTT CGGCAAAACC TCACCGTTTC ATACACCCAA AATTGAATCG
ACTGGCTCTG GTGGAGGGTT GAAATTATTC TGCCAAGGTG TGGGAATGAA GTTTCCTGAT
ATTGCCAATT CATCCCGGCG GATCAAACCA TCAGAAATTG ACCTATGCCA GCGAAACGGT
GTTCACGAGG TGATTGAAAT CTTGATCGGC TTTGATGGGA TCGTGCTTGC GCAAAGTAAA
TTGGCTGAAA GTATCCCGCT AACACGCCGC GAACTCTACC TAGCATTGGC TAAAAGCGTG
CCAAATCCAG ATGGTAGTGC AACCACCATC GATAATCCGT TCATAACGTG GCAAGACATC
AACCCTAGAT TGCCGAACAT CGAAATCGAA GTGTTTGGTC CTCCCTCGAC TTCAGGTACA
AGAGACGCTT TTTCTGAATT GGTACTCGAT TATGGTTGTC ATACCTTTGC TTGGTTAGCT
CAGATGAGTG AGCCACAAAG CCAGGCACAG GCAACGTCAA AAGAAGCCAG AATCCGAAAA
AGCCAGCAAA GACGCTTATG CCGGATGTTA CGGGAAGACG GCGCTTACAT TGATGCGGGG
GAGAATGATA ATCTGGTTGT GCAAAAATTA AATGCCAATC CAAATGCGCT GGGTTTATTG
GGCTTCAGCT TTCTTGATCA GAATAGAGAC CGCATTAAAA GCGCTAAAAT CGATGGATTT
CTTCCGAGCT TTAGCTCTAT TGCCAATGGT GATTACCCTA TTTCAAGGCC ACTCTACTTT
TATGTTAAAA AAGCACATAT TGGCATGATC CCAGGAATAG AGGCGTTTAT ACGCGAATTT
ATCAGTGATA ATGCGTCCGG CGAAAGTGGC TATTTGCCGC GCAAGGGGAT GATCCCACTG
ACCAAATCAG AACGCCAAGC CATCGAATAT CGAATCAACG CCTTGCACCC AACTATGCAT
CAATAG
|
|---|
| Protein sequence | MKPSTLSIIC ACVWTLISAP ANAMRDYIDV VGSSTVYAFS TVVAERFGKT SPFHTPKIES
TGSGGGLKLF CQGVGMKFPD IANSSRRIKP SEIDLCQRNG VHEVIEILIG FDGIVLAQSK
LAESIPLTRR ELYLALAKSV PNPDGSATTI DNPFITWQDI NPRLPNIEIE VFGPPSTSGT
RDAFSELVLD YGCHTFAWLA QMSEPQSQAQ ATSKEARIRK SQQRRLCRML REDGAYIDAG
ENDNLVVQKL NANPNALGLL GFSFLDQNRD RIKSAKIDGF LPSFSSIANG DYPISRPLYF
YVKKAHIGMI PGIEAFIREF ISDNASGESG YLPRKGMIPL TKSERQAIEY RINALHPTMH
Q
|
|---|
| |