| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3307 |
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| Symbol | |
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| ID | 4175084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3969095 |
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| End bp | 3970444 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056338 |
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| Product | dienelactone hydrolase-like |
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| Protein accession | YP_662867 |
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| Protein GI | 109899612 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4188] Predicted dienelactone hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTTA AGGGTGTAAC TAGTCACTTG GCGAAAAATA TATGGCTCAA AGGTGCCGTC
GTCGTATTAG CGTTAGGGGT AAATGTAACT GCATTTGCCG AAAATAGAAT TGATACCCAG
CGCCCTGATG CCCCTGAGCT TGCTGCTTAT GGTGAGCACA GCATTGGCGT ACGCCAGCTT
GAAGTGGCGA ACCCGAATCA GATTGAGATG CTAAAACTCG ACCCCACTAA ACCAGAGCCC
GCAACGTTGC CCCGTTACGA TCGGCCGCTT ACATTAGAAG TTTGGTACCC AGCGCAAAAA
GGCAGTACGG GCAATACTAC TCTTAAGGCT TATATACGTG ATGGTAAAAC CGAAGTGGAT
TTACAGGGTA AGGCTGTGCG AGATGCTAAG CCTGAAATGA CTGACAGCGC TTTTCCGTTG
GTGCTTATTT CACATGGATA CCCGGGGAAT CGTTTTTTGC TCGCGCACTT AGCTGAAAAT
ATTGCTTCGA AGGGTTATGT AGTGGTGTCT ATCGATCACA CCGACTCAAC TTATCGCACT
AAAGCGGCGT TTTCTTCGAC TTTAGTTAAT CGCCCGGTGG ATCAGCTTTT CGTGTTATCA
CAAATAGAGG GCATGGCGAA AGACAAAGAT TCATTTTTGT ACGGTTTGGT TGATACCTCT
GACACCGGTC TAATCGGGTA TTCAATGGGA GGTTACGGCG CGGTGATTAA CGCCGGGGCT
GGGGTAACTG AACAAGTGGT AGCGAGCAAG CAAAGCCCGC CGTTTGGTAC GCTCAAACGT
CATCAGTCAG GCATTAAGTC AGGGGCAGAC AAGCGTTTAA AGACCGTTAT AGCGTTTGCG
CCATGGGGTA TGAATTACCA CATGTTTAGC AATGATACCC TTAAAGAAAT CAGTGTGCCT
ATGTTGCTCA TCGCAGGCTC TCAGGACGAC GTATCGGGTT ATGAGAACGG CGTTCGTGCC
ATTTGGCAGG GGGCCAGCAA CGTGAATCGC TCACTTCTGA CCTATGATAA TGCCAATCAT
AATGCGGGTG CGGTGATGCC GGCACCAGAA GAGTCCTATA TGTTTGATAA GGAATTAGGT
TTTAATATCA GTGAGCATTA TATCGATGCT GTTTGGGATA ATGCACGCAT GAACAATATT
GCACAGCATT TTGTGACCGC ATGGCTAGAT AAATACTTGA AAAACGATAC GTCTAAAGAA
GCGTATTTGG ATATTGTGCC CGATTCAAAC GGCGGTGTTT ACGCCCTTGA CGAAGAAGGT
GAGCCGAAAC CAGAACATAC TTATTGGAAA GGCTTTGGAA ACCGCACGGC CAAGGGACTG
CACTTCGAGA CCCTAGCGCC TAAAAAATAA
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| Protein sequence | MGFKGVTSHL AKNIWLKGAV VVLALGVNVT AFAENRIDTQ RPDAPELAAY GEHSIGVRQL
EVANPNQIEM LKLDPTKPEP ATLPRYDRPL TLEVWYPAQK GSTGNTTLKA YIRDGKTEVD
LQGKAVRDAK PEMTDSAFPL VLISHGYPGN RFLLAHLAEN IASKGYVVVS IDHTDSTYRT
KAAFSSTLVN RPVDQLFVLS QIEGMAKDKD SFLYGLVDTS DTGLIGYSMG GYGAVINAGA
GVTEQVVASK QSPPFGTLKR HQSGIKSGAD KRLKTVIAFA PWGMNYHMFS NDTLKEISVP
MLLIAGSQDD VSGYENGVRA IWQGASNVNR SLLTYDNANH NAGAVMPAPE ESYMFDKELG
FNISEHYIDA VWDNARMNNI AQHFVTAWLD KYLKNDTSKE AYLDIVPDSN GGVYALDEEG
EPKPEHTYWK GFGNRTAKGL HFETLAPKK
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