Gene Patl_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3305 
Symbol 
ID4175082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp3967304 
End bp3967834 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content48% 
IMG OID638056336 
Producthypothetical protein 
Protein accessionYP_662865 
Protein GI109899610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.854126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA ATATAGTGCT ATTACTCACT GCGATTCTGC TAGGTGGCTG TGAAAGTCAG 
CCTGACTATC GTGAAGCGAC CAAAGGGGGC TTTGGCTATA CCGAAAGCAA ATTTACTGAC 
ACTCAATATC GCGTGAACTT TAAAGGCCGA GGCACGGATA AATCAAAAGC AATGGATTAC 
GCCATGTTGC GCGCCGCGGA ACTGACCTTA GAGCAAGGTT ACGACTGGTT CGTAGTCACA 
GACAGGGAAA CCTTAGTGGA TAAAGAAAAC GTGCAACTTA GCCCGCAGGT TGGTTTTAGC 
CGCCGCTACG CCACAGTAAC CGACTGTGGG GCGTTGACCT GCCGGACCTC TCGCTTTCCC 
CGCAGTCAAT TCGAGACAGG CGTGTTTATT GGCGGCTCTG AGCAAAGTGA AATTGAGAGT 
ATTTTAAATA TTGAGATGGG TAAGGGGGCA CAACCTAATT CAGGCACCAG TTTTGACGCG 
ACGCAAGTGA CAGAAAATTT AGGGCCGAAG AAAGACACAT TACAGGAGTA A
 
Protein sequence
MKTNIVLLLT AILLGGCESQ PDYREATKGG FGYTESKFTD TQYRVNFKGR GTDKSKAMDY 
AMLRAAELTL EQGYDWFVVT DRETLVDKEN VQLSPQVGFS RRYATVTDCG ALTCRTSRFP 
RSQFETGVFI GGSEQSEIES ILNIEMGKGA QPNSGTSFDA TQVTENLGPK KDTLQE