Gene Patl_3304 details

Gene Information

• Locus tag: Patl_3304
• ID: 4175081
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 3966567
• End bp: 3967199
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 638056335
• Product: NAD-dependent epimerase/dehydratase
• Protein accession: YP_662864
• Protein GI: 109899609
• COG category: [R] General function prediction only
• COG ID: [COG2910] Putative NADH-flavin reductase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATCG CAGTTTTAGG TGCAACAGGT TGGATTGGTA GCACAGTAGT AACAGAAGCG 
AAAAGTCGAG GACATGAAGT AGTGGCAATC GTACGTGATG CTGCGAAGTT AAACGCTCAA 
GACGTTACCT CCCGGGTTTA TGATTTACAA AGCACTGCAG ACTTCGCGCC TGTCGTTGCC 
GATGCGGATG TGGTTATCGC GTCTGTTGGT GGACGCGCAG CAGGTAATCA TGAAATAGTC 
GCAAAAACAG CTGAGCGTCT ACTGGCATCT CTTGCCAATA GCAGTAAACG TTTAATATGG 
GTAGGCGGCG CCGGTAGTTT AGAAATAGCG CCGGGTGTAG CGCTTGTTAC CTCACCTGAC 
TTCCCTGCTG AATATAAAGA TGAGGCCATC GCCCAAGGTG AAGCCCTCGA TGTATTTCGC 
AGCACTAAAT CGAAAACACC CTGGACCTTC GTTAGCCCTG CGGCTGTGCT CTACCCAGGT 
GATAGCGTAG GACAATTTCG TATTGGCGGT GATGCATTTT TCACCAACAG TGACGGTGAG 
AGTAAAATAT CGGTCACTGA TTACGCCAAA GCCTTAGTGG ATGAAGCAGA AAATGCTGAG 
CATGTAAATC AGCGCATTAG CGTCGCTTAC TAA 

 

Protein sequence

MKIAVLGATG WIGSTVVTEA KSRGHEVVAI VRDAAKLNAQ DVTSRVYDLQ STADFAPVVA 
DADVVIASVG GRAAGNHEIV AKTAERLLAS LANSSKRLIW VGGAGSLEIA PGVALVTSPD 
FPAEYKDEAI AQGEALDVFR STKSKTPWTF VSPAAVLYPG DSVGQFRIGG DAFFTNSDGE 
SKISVTDYAK ALVDEAENAE HVNQRISVAY