| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3300 |
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| Symbol | |
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| ID | 4175077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3961693 |
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| End bp | 3964089 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056331 |
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| Product | fatty acid cistrans isomerase |
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| Protein accession | YP_662860 |
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| Protein GI | 109899605 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATA CACATTCCAG ATGGATTAAA ATATTCATCG CCGTCATTCT TGTCTGTTCG
GGTTGCGCGA CCATTGCCAA TCTTGATTTC AACAAGCTTT ATGGCCACGA AGCCCCAGTG
AACCGCGCAC CAGCCAGTGT CACGCAAGCG TTATTAGAAA GCCCTGCCAC CGCATTCTAC
CAAACCAAAG TAGCACCCGT AATTGAAGGG CGTTGTGTTG TGTGCCATGC CTGCTACGAC
GCCCCTTGCC AGCTTAAGAT GAGCTCGCCA GAAGGAATAG ATCGCGGCGC GAGTAAAGAA
GTTGTCTACC ATGGCTCGCG TATACTTGCC GCCACGCCAA ATCGATTGTT TTTAGACGCA
TTAGATTCTC CCGACTGGCG CAAGCGTGGC TTTTATCCTG TGCTAAATGA GCGAGAACAA
ACCCCTATTG CCAACACGCA GGCGTCAGTT TTAGCAAAAA TGCTGAAGCT TAAACAGCAA
CACCCTTTAC CTGACGACAA ATTATTAGAC GAACGCTTCG ATGTCTCTAT CGATCGCAGC
CAACAATGTC CTACCATTTC GGAATTTGAT GGCTATGCCA CAAGCCAAGC ATTTGGTGGA
ATGCCCTACG CTCTCCCAGA ATTAACCGGT GAGGAGCACA ATATACTCAT GAGTTGGATG
GAGAGCGGCG CTTATATGCC TGCTCGCGCA CCACTGTCTG AAGCCCAAGA GACAGCGATA
AACTCGTTAG AAGACTTTTT AAATGCTGAC GATTTGAAAA TGCAGTTAAG TGCTCGCTAC
ATTTATGAAC ACTTGTTTAG CTCTCATTTG TACTTTAGTG AGATAACCGC GCCTAATACC
CAGCCACAGT TTTTTAATCT TGTGCGTTCA AGAACGCCAT CAGGGCAAGC TATTGATGTC
ATTCCGAGTC GCCGCCCTTT TGATGAGCCA GGGGTAAAGC GCGTTTATTA CCGCTTGCAG
CCTGTTATGT CGACCATAGT CAACAAAACA CACCAGCCTT ATGCTATTCA CAAAGCACTC
ACCGACAAAT GGCAGAAGTG GTTTGTAGAC GCTGACTACA CAGTGACCGA GTTACCTAGC
TATCAGCCAA AAGTAGCGGC AAACCCGCTA ACGGCTTTCA CTCAATTACC GGAAAACGCG
CGCTACCGCT TTATGCTCGA GCGTGCACAG AACACCATTA TGGGTTACAT CAAAGGGCCC
GTTTGTCGTG GTCAGGTGGC GTTGAATGTC ATCAATGATC GTTTCTGGGT TTACTTTGTA
AAACCAGAAG TGGCAGATTC ACCCAAGATA CACGCCTTCT ACGAATCACA AAAAGACAAC
CTTCGCCTCC CTGCGGAACA CGAGAGCACC GCATTTGCGG TAACTTGGCT TGAATATGCC
TCACGACAAG GTGATTACAT GCGTGCACGG CATGATTTCA TGGCAACCGC CTTGGAAGAT
GGCCAGCATT TCACTGCTAA CGATATATGG GATGGTGACG GTGAAAATGA CAACGCCACG
CTGACGGTGT TTCGTCACTT TGACAATGCC ACCGTCATTA AAGGCTTAGT GGGTAAGCCT
CCCAAAACCG CTTGGGTTAT CGACTACGCA TTACTAGAGC GTATTCACTA CCTGTTAGTC
GCTGGGTTTG ATGTGTATGG CAATTATGGC CATCAATTGA TGACGCGCCT GTACATGGAC
TTTCTGCGCA TGGAAGGTGA ATCAAACTTT TTGGCCTTTT TACCGCCTAA AACGCGTCAC
GAAGAGTTGG CCTCTTGGTA TCAAAAAGCT GGGCCAGAGC TAACCGAATT TGTTGAGGGT
AAAATCAACC CGTTCGATCA ACCTAGTGGT ATGCAGTTTA AAACCCAGCA CCACAAGAAA
GAATTATATG ATATTTTTGC TGAACATGTG AAAGACGTGC AACCCAGCCG TTACCGATTA
CAAGACAGCG AATTAGGTCA AAATAGCAAA GCCCTGCTCG GACAATTAGC CAACATCAAA
GGCCAAAGCG CCTCAATATT GCCCGAGCTG AGCATGATCA TGGTCGAGCC CACAGACAGT
GATAAACCAG AGATTTTCAC CTTGGTGAGA AACAGTGCGC ATTTCAATGT GAACAGCTTG
TTTTCTGAAG ATGCTAATCG CGACCACGCC AATGATGACG TGACGTTAGT ACATGGGTTA
CTCGGTAGTT ATCCCGATGT ATTCTGGCGG GTAAAAGAAG CAGATCTGGC CAAATTAGTG
GCGAAAGCTC AGCAAATTGA AAACGAGCAA AATTATGAAG CCTTCTTGGA TCTATTTGCG
GTAAGGCGCA CAACCAAAGA TTTTTGGGCA TTCAGCGACA AACTCAATCA AACCTTCATG
GAGCACAATC CGATCGAAGG TGGACTGCTG GATTACAATC GATTAGAAAA CCGTTAG
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| Protein sequence | MQNTHSRWIK IFIAVILVCS GCATIANLDF NKLYGHEAPV NRAPASVTQA LLESPATAFY
QTKVAPVIEG RCVVCHACYD APCQLKMSSP EGIDRGASKE VVYHGSRILA ATPNRLFLDA
LDSPDWRKRG FYPVLNEREQ TPIANTQASV LAKMLKLKQQ HPLPDDKLLD ERFDVSIDRS
QQCPTISEFD GYATSQAFGG MPYALPELTG EEHNILMSWM ESGAYMPARA PLSEAQETAI
NSLEDFLNAD DLKMQLSARY IYEHLFSSHL YFSEITAPNT QPQFFNLVRS RTPSGQAIDV
IPSRRPFDEP GVKRVYYRLQ PVMSTIVNKT HQPYAIHKAL TDKWQKWFVD ADYTVTELPS
YQPKVAANPL TAFTQLPENA RYRFMLERAQ NTIMGYIKGP VCRGQVALNV INDRFWVYFV
KPEVADSPKI HAFYESQKDN LRLPAEHEST AFAVTWLEYA SRQGDYMRAR HDFMATALED
GQHFTANDIW DGDGENDNAT LTVFRHFDNA TVIKGLVGKP PKTAWVIDYA LLERIHYLLV
AGFDVYGNYG HQLMTRLYMD FLRMEGESNF LAFLPPKTRH EELASWYQKA GPELTEFVEG
KINPFDQPSG MQFKTQHHKK ELYDIFAEHV KDVQPSRYRL QDSELGQNSK ALLGQLANIK
GQSASILPEL SMIMVEPTDS DKPEIFTLVR NSAHFNVNSL FSEDANRDHA NDDVTLVHGL
LGSYPDVFWR VKEADLAKLV AKAQQIENEQ NYEAFLDLFA VRRTTKDFWA FSDKLNQTFM
EHNPIEGGLL DYNRLENR
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