| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3287 |
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| Symbol | |
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| ID | 4175064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3946633 |
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| End bp | 3947259 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056318 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | YP_662847 |
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| Protein GI | 109899592 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTCC CCTTGTCACG TAAAATCGTT TTAGCCACAG GCAACAAAGG CAAAGTGGCT
GAGCTTAGTC AGTTGCTTAG CCCACTACAC ATAAACATTA TTCCACAGAG TGAATTTGAC
GTTCCTGAGG TGGCCGAAAC AGGTACCACC TTCGTCGAAA ACGCCATCAT CAAGGCCCGT
CACGCAGCCA AGATTACGGG CTTGCCCGCT ATTGCTGACG ATTCTGGTTT AGCCGTAGAT
GCCTTAGGCG GAGCACCTGG CGTATACTCA GCACGCTATG CCGGTAGCCA TGCCACAGAT
AGTGATAATA TTGATAAGTT GCTTCACTCA CTAAGTGATA TTGCACCAGT GAAACGCCAA
GCGCGTTTCT TATGTGTATT GGTGTATATG CGCAGCAGTG AAGACCCCAC CCCCATCATT
TGCCAAGGCG AATGGCATGG CGAAATAACC CTCGAGCGTA GTGGTGAAAG TGGCTTTGGT
TACGACCCTG TGTTCTGGGT AGAACAAAAA AAGTGTACTT CTGCACAACT AACAAAAGAG
CAAAAGAACG CCCTAAGTCA TCGCGGCCAA GCGTTACAAC AGCTATTAGT AAAACTGAGC
GCAGATTTTG AAAAAGCAGG TGAATAG
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| Protein sequence | MSFPLSRKIV LATGNKGKVA ELSQLLSPLH INIIPQSEFD VPEVAETGTT FVENAIIKAR
HAAKITGLPA IADDSGLAVD ALGGAPGVYS ARYAGSHATD SDNIDKLLHS LSDIAPVKRQ
ARFLCVLVYM RSSEDPTPII CQGEWHGEIT LERSGESGFG YDPVFWVEQK KCTSAQLTKE
QKNALSHRGQ ALQQLLVKLS ADFEKAGE
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