Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3281 |
Symbol | |
ID | 4175058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3940131 |
End bp | 3941042 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638056312 |
Product | ATPase |
Protein accession | YP_662841 |
Protein GI | 109899586 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCTTA ATTATTTCGG ACTTTCAGAT AATCCGTTTT CTATCGCACC TAATCCCGCG TACCTATATA TGAGTCCAAG ACACAAGGAA GCCCTTGCTC ATTTGACCTT TGGGTTACGG GAAAGTGGCG GTTTTGTGAT GTTAACAGGC GAAGTCGGAA CGGGGAAAAC CACCGTGTCG CGTAAGTTAT TACAACAGCT GCCTGATAAT ACTCAGGTCG CCATGGTGCT TAACCCAACG CTCTCAGCCA TTGAGTTACT CGCCACCATT TGTGACGAGC TAAGCATAGA TTATCAACAC GAACGAGCGA GCCTAAAATA CTTTACGGAT TTGATCCTCA ACAAGCTGGT GATTAATCAC AACGCAGGCT TGAACACGAT ATTGATTGTG GATGAAGCCC AGCATTTGTT GCCAGAGGTG CTTGAGCAGT TACGTTTGTT GACCAACCTT GAGACCAACC GGGAAAAGCT GCTCAAAGTG GTGTTAATCG GTCAGCCAGA ATTGCAGCAA TTGTTGAAAC GTAACGAGCT GCGCCAATTA GCCCAGCGCA TCACCGCCCG TTACCACTTG CTACCGCTCA CTTCTGGTGA AGTAAAAGCC TATATTCATC ACCGATTAGG GGTAGCAAAT GGCGATAGCA GTGTTTTTAG TGCAGGCGCA CTGGGCGCTG TGTATCAGGT CACTGGCGGT ATACCGAGGG TGATTAATTT ACTATGTGAC AGGGCGTTAA CGTTAACGTT TACTAAACAA GCTCCCGTGG TACATACCCA TATATTTTAT GCTGCCGCAG AGCAAATCTT GGGCGCTGAT GTGGTGGCTC AGCGCAGAGG AAAACAGCGT ACCCTAATAC TCGCAGGCTT GTTTGTACTG GCCTTCGGGT TAGGCTTTAT GGGAGGCCAT TGGTATGGAT AA
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Protein sequence | MYLNYFGLSD NPFSIAPNPA YLYMSPRHKE ALAHLTFGLR ESGGFVMLTG EVGTGKTTVS RKLLQQLPDN TQVAMVLNPT LSAIELLATI CDELSIDYQH ERASLKYFTD LILNKLVINH NAGLNTILIV DEAQHLLPEV LEQLRLLTNL ETNREKLLKV VLIGQPELQQ LLKRNELRQL AQRITARYHL LPLTSGEVKA YIHHRLGVAN GDSSVFSAGA LGAVYQVTGG IPRVINLLCD RALTLTFTKQ APVVHTHIFY AAAEQILGAD VVAQRRGKQR TLILAGLFVL AFGLGFMGGH WYG
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