Gene Patl_3281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3281 
Symbol 
ID4175058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3940131 
End bp3941042 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content47% 
IMG OID638056312 
ProductATPase 
Protein accessionYP_662841 
Protein GI109899586 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTTA ATTATTTCGG ACTTTCAGAT AATCCGTTTT CTATCGCACC TAATCCCGCG 
TACCTATATA TGAGTCCAAG ACACAAGGAA GCCCTTGCTC ATTTGACCTT TGGGTTACGG
GAAAGTGGCG GTTTTGTGAT GTTAACAGGC GAAGTCGGAA CGGGGAAAAC CACCGTGTCG
CGTAAGTTAT TACAACAGCT GCCTGATAAT ACTCAGGTCG CCATGGTGCT TAACCCAACG
CTCTCAGCCA TTGAGTTACT CGCCACCATT TGTGACGAGC TAAGCATAGA TTATCAACAC
GAACGAGCGA GCCTAAAATA CTTTACGGAT TTGATCCTCA ACAAGCTGGT GATTAATCAC
AACGCAGGCT TGAACACGAT ATTGATTGTG GATGAAGCCC AGCATTTGTT GCCAGAGGTG
CTTGAGCAGT TACGTTTGTT GACCAACCTT GAGACCAACC GGGAAAAGCT GCTCAAAGTG
GTGTTAATCG GTCAGCCAGA ATTGCAGCAA TTGTTGAAAC GTAACGAGCT GCGCCAATTA
GCCCAGCGCA TCACCGCCCG TTACCACTTG CTACCGCTCA CTTCTGGTGA AGTAAAAGCC
TATATTCATC ACCGATTAGG GGTAGCAAAT GGCGATAGCA GTGTTTTTAG TGCAGGCGCA
CTGGGCGCTG TGTATCAGGT CACTGGCGGT ATACCGAGGG TGATTAATTT ACTATGTGAC
AGGGCGTTAA CGTTAACGTT TACTAAACAA GCTCCCGTGG TACATACCCA TATATTTTAT
GCTGCCGCAG AGCAAATCTT GGGCGCTGAT GTGGTGGCTC AGCGCAGAGG AAAACAGCGT
ACCCTAATAC TCGCAGGCTT GTTTGTACTG GCCTTCGGGT TAGGCTTTAT GGGAGGCCAT
TGGTATGGAT AA
 
Protein sequence
MYLNYFGLSD NPFSIAPNPA YLYMSPRHKE ALAHLTFGLR ESGGFVMLTG EVGTGKTTVS 
RKLLQQLPDN TQVAMVLNPT LSAIELLATI CDELSIDYQH ERASLKYFTD LILNKLVINH
NAGLNTILIV DEAQHLLPEV LEQLRLLTNL ETNREKLLKV VLIGQPELQQ LLKRNELRQL
AQRITARYHL LPLTSGEVKA YIHHRLGVAN GDSSVFSAGA LGAVYQVTGG IPRVINLLCD
RALTLTFTKQ APVVHTHIFY AAAEQILGAD VVAQRRGKQR TLILAGLFVL AFGLGFMGGH
WYG