Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3259 |
Symbol | recA |
ID | 4175036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3908741 |
End bp | 3909772 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056290 |
Product | recombinase A |
Protein accession | YP_662819 |
Protein GI | 109899564 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGATA ACAAAACTCG CGCGCTAACC GCCGCTCTTG GTCAAATCGA AAAGCAATTC GGTAAAGGCG CAATCATGCG CTTGGGTGAC AACCAAGCAA TGGATATTGA AGCGATTTCT ACTGGGTCTC TTACTATAGA TATCGCCTTA GGCATAGGCG GCTTACCGTG TGGACGTGTG GTTGAAATAT ACGGACCTGA ATCATCAGGT AAAACCACGC TTACCTTACA AGCTATTGCT GAAGCGCAAA AAATGGGCAA AACTTGCGCG TTTGTTGATG CTGAGCATGC GCTTGATCCA ATTTATGCTG GTAAGTTGGG TGTTAACATT GATGATTTGT TAGTGTCACA GCCGGACACT GGTGAACAAG CGTTAGAGAT TTGTGACATG TTAGTTCGCT CAGGCGCAGT TGATGTGGTT GTAGTCGATT CTGTAGCGGC ATTGACACCA AAAGCGGAAA TCGAAGGCGA CATGGGAGAT TCACACGTTG GCTTGCAAGC CCGTTTGATG TCACAAGCCT TGCGTAAGCT AACGGGTAAC ATTAAGCGTT CGAACACCTT AGTCATATTC ATTAACCAGA TTCGTATGAA AATTGGTGTG ATGTTTGGTT CACCTGAAAC AACTACTGGT GGTAACGCAC TTAAGTTTTA CGCTTCAGTA CGTTTAGATA TTCGCCGTAT CGGTGCGATT AAAGACGGTG ATGAAGTAGT CGGTAATGAA ACTCGGGTGA AAGTGGTTAA AAACAAAGTG GCTCCGCCAT TTAAACAAGC TGAGTTCCAG ATCATGTACG GTCAAGGGAT CTGTAAAGAA GCCGAATTGA TTGATTTAGG CGTTAAGCAG AAGCTTGTTG AGAAAGCGGG CGCTTGGTAC AGCTACAATG GCGAACGCAT CGGTCAGGGT AAAGCTAACG TGGTTAAATA CCTTAAAGAG CATACCGAGA TGTCTAACGA CATTGAGCAA AAGCTGCGCG CTGAACTGCT ATTAAAGAAA ACCGTTAAAG CAGAAGAGCC TGCAAAAGCT GACGAAGAAT AA
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Protein sequence | MDDNKTRALT AALGQIEKQF GKGAIMRLGD NQAMDIEAIS TGSLTIDIAL GIGGLPCGRV VEIYGPESSG KTTLTLQAIA EAQKMGKTCA FVDAEHALDP IYAGKLGVNI DDLLVSQPDT GEQALEICDM LVRSGAVDVV VVDSVAALTP KAEIEGDMGD SHVGLQARLM SQALRKLTGN IKRSNTLVIF INQIRMKIGV MFGSPETTTG GNALKFYASV RLDIRRIGAI KDGDEVVGNE TRVKVVKNKV APPFKQAEFQ IMYGQGICKE AELIDLGVKQ KLVEKAGAWY SYNGERIGQG KANVVKYLKE HTEMSNDIEQ KLRAELLLKK TVKAEEPAKA DEE
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