Gene Patl_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3259 
SymbolrecA 
ID4175036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3908741 
End bp3909772 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content45% 
IMG OID638056290 
Productrecombinase A 
Protein accessionYP_662819 
Protein GI109899564 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATA ACAAAACTCG CGCGCTAACC GCCGCTCTTG GTCAAATCGA AAAGCAATTC 
GGTAAAGGCG CAATCATGCG CTTGGGTGAC AACCAAGCAA TGGATATTGA AGCGATTTCT
ACTGGGTCTC TTACTATAGA TATCGCCTTA GGCATAGGCG GCTTACCGTG TGGACGTGTG
GTTGAAATAT ACGGACCTGA ATCATCAGGT AAAACCACGC TTACCTTACA AGCTATTGCT
GAAGCGCAAA AAATGGGCAA AACTTGCGCG TTTGTTGATG CTGAGCATGC GCTTGATCCA
ATTTATGCTG GTAAGTTGGG TGTTAACATT GATGATTTGT TAGTGTCACA GCCGGACACT
GGTGAACAAG CGTTAGAGAT TTGTGACATG TTAGTTCGCT CAGGCGCAGT TGATGTGGTT
GTAGTCGATT CTGTAGCGGC ATTGACACCA AAAGCGGAAA TCGAAGGCGA CATGGGAGAT
TCACACGTTG GCTTGCAAGC CCGTTTGATG TCACAAGCCT TGCGTAAGCT AACGGGTAAC
ATTAAGCGTT CGAACACCTT AGTCATATTC ATTAACCAGA TTCGTATGAA AATTGGTGTG
ATGTTTGGTT CACCTGAAAC AACTACTGGT GGTAACGCAC TTAAGTTTTA CGCTTCAGTA
CGTTTAGATA TTCGCCGTAT CGGTGCGATT AAAGACGGTG ATGAAGTAGT CGGTAATGAA
ACTCGGGTGA AAGTGGTTAA AAACAAAGTG GCTCCGCCAT TTAAACAAGC TGAGTTCCAG
ATCATGTACG GTCAAGGGAT CTGTAAAGAA GCCGAATTGA TTGATTTAGG CGTTAAGCAG
AAGCTTGTTG AGAAAGCGGG CGCTTGGTAC AGCTACAATG GCGAACGCAT CGGTCAGGGT
AAAGCTAACG TGGTTAAATA CCTTAAAGAG CATACCGAGA TGTCTAACGA CATTGAGCAA
AAGCTGCGCG CTGAACTGCT ATTAAAGAAA ACCGTTAAAG CAGAAGAGCC TGCAAAAGCT
GACGAAGAAT AA
 
Protein sequence
MDDNKTRALT AALGQIEKQF GKGAIMRLGD NQAMDIEAIS TGSLTIDIAL GIGGLPCGRV 
VEIYGPESSG KTTLTLQAIA EAQKMGKTCA FVDAEHALDP IYAGKLGVNI DDLLVSQPDT
GEQALEICDM LVRSGAVDVV VVDSVAALTP KAEIEGDMGD SHVGLQARLM SQALRKLTGN
IKRSNTLVIF INQIRMKIGV MFGSPETTTG GNALKFYASV RLDIRRIGAI KDGDEVVGNE
TRVKVVKNKV APPFKQAEFQ IMYGQGICKE AELIDLGVKQ KLVEKAGAWY SYNGERIGQG
KANVVKYLKE HTEMSNDIEQ KLRAELLLKK TVKAEEPAKA DEE