Gene Patl_3258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3258 
Symbol 
ID4175035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3908331 
End bp3908663 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content44% 
IMG OID638056289 
ProductFlhB domain-containing protein 
Protein accessionYP_662818 
Protein GI109899563 
COG category[S] Function unknown 
COG ID[COG2257] Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB 
TIGRFAM ID[TIGR00789] flhB C-terminus-related protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGATA ATACAAATAA AGACAACTCG AAAGCCAGAA GTGCTGTCGC ACTGAAACAC 
CATGAAGGTG ATAAAAAAAA TGCGCCTCAG GTAGTTGCAA AAGGGTTCGG CGACTTAGCA
GATGAAATCA TAACGCTGGC GAAAGAAAGC GGCGTGTTGA TCCATGAAGA TCCGTACTTA
AGTGAATTTT TAGCGAGTTT AGATTTAGGT CAAGAAATAC CAGAAGAGCT ATACCACGTG
ATTGCCGAAC TCATCAGCTT CTCCTACGTT CTGCAGGGAA AATTCCCAGA GAGCTGGGCG
AAAGACTATA ACAAGGTGTC CAAGCAGGTT TGA
 
Protein sequence
MTDNTNKDNS KARSAVALKH HEGDKKNAPQ VVAKGFGDLA DEIITLAKES GVLIHEDPYL 
SEFLASLDLG QEIPEELYHV IAELISFSYV LQGKFPESWA KDYNKVSKQV