| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3256 |
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| Symbol | |
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| ID | 4175033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3904430 |
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| End bp | 3904966 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638056287 |
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| Product | heme exporter protein CcmA |
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| Protein accession | YP_662816 |
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| Protein GI | 109899561 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGTCA AGGGGCCAAA TGGTGCGGGC AAAACAAGTC TATTGAGAGT ATTAACCGGA
TTAGTAAACG CTGACAGCGG CTCGGTTGCG TACCGCGGGC AAAACATTAT GCAAAATCGT
GAGGCTTACC AAAGTGACTT ACTCTATTTT GGTCATGCTT TGGGCATAAA TCGCAGTTTA
AATCCACTTG AGAATTTAAT GTATTGGTGT TGCCAACACA ATGTAATGAC CAGTGAAAAC
GCAATATACA ATGTATTGGG TGTACTAGGG TTAGTGGGTT TAGAAGATGT GCGGGTAAGT
AATTTATCGG CAGGGCAGCA AAGGCGTGTT GCATTAGCGA GATTTTGGTT AAAAACCACT
GCCACCGTAT GGATATTAGA TGAACCATTC ACTGCACTAG ACGTACAAGG GATTGCGCTG
TTAAACGCTC GAATTATTCA GCATTTGCAG CAAGATGGGT GTGTGGTCAT GACATCTCAT
CAAGCGTTAG AGGTGGATTA CCCAACAAAA GAGTTACAGT TGGAATATCG CATATGA
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| Protein sequence | MYVKGPNGAG KTSLLRVLTG LVNADSGSVA YRGQNIMQNR EAYQSDLLYF GHALGINRSL
NPLENLMYWC CQHNVMTSEN AIYNVLGVLG LVGLEDVRVS NLSAGQQRRV ALARFWLKTT
ATVWILDEPF TALDVQGIAL LNARIIQHLQ QDGCVVMTSH QALEVDYPTK ELQLEYRI
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