| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3254 |
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| Symbol | |
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| ID | 4175031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3903019 |
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| End bp | 3903765 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056285 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_662814 |
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| Protein GI | 109899559 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGAAAT GGTTACATCC TTATGCGAAA ACCCAAAATG CATACCAGCT ATGTGAGCGC
TTACTCCCTT GGTTTGTCAC TTCATCGCTT ATCTCTTTTA GCGTTGGGAT GATATGGGGC
CTTGCTTTTG CTCCCTCTGA TTACCAGCAA GGGGATTCCT TTCGCATAAT CTATATTCAC
GTGCCTAGCG CGATCTTATC GATGGGTGCA TACAGTGCGA TGGCGATTTC AGCTTTTATC
GGTTTAGTCT GGCAGGTGCG TACCGCATTT ATGGCCATGA TAGCGCTCGC GCCAATTGGT
GCAGTGGTAA CCTTTATCGC ATTGTTCACC GGCGCTGCTT GGGGGAAACC CATGTGGGGC
ACTTGGTGGG TGTGGGATGC GCGCTTAACC TCTGAGTTGA TTTTGTTATT TTTGTACTTA
GGCGTTATTT CCTTGTATGC CTCATTTGAG GATAAGCAGC AAGCAGGCAA AGCCGCAGGT
GTGATGGCAC TGGTAGGCGT AATCAATTTG CCGATTATTC ATTTTTCCGT GGAATGGTGG
AATACCTTAC ACCAGGGCGC GAGTATCACT AAATTCGATA AGCCATCCGT AGCGCCTGAA
ATGCTCTGGC CTTTGTTGAT CAGCATCGTG GGACTGGCTT TGGTGATGGG CGCAATATTT
ATTCGACGTT TACAGAACGA AATATTACGT CGTGAGCTGC ATCGCCCTTG GGTTCAATCG
TTAGTTACTG AAACGAAGAG GAAGTAA
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| Protein sequence | MWKWLHPYAK TQNAYQLCER LLPWFVTSSL ISFSVGMIWG LAFAPSDYQQ GDSFRIIYIH
VPSAILSMGA YSAMAISAFI GLVWQVRTAF MAMIALAPIG AVVTFIALFT GAAWGKPMWG
TWWVWDARLT SELILLFLYL GVISLYASFE DKQQAGKAAG VMALVGVINL PIIHFSVEWW
NTLHQGASIT KFDKPSVAPE MLWPLLISIV GLALVMGAIF IRRLQNEILR RELHRPWVQS
LVTETKRK
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