| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3252 |
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| Symbol | |
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| ID | 4175029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3902288 |
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| End bp | 3902782 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056283 |
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| Product | cytochrome c-type biogenesis protein CcmE |
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| Protein accession | YP_662812 |
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| Protein GI | 109899557 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCTA GACGTCAAAA ACGCCTGATA GTGATATCCG CTATCGTATT GGTAATCGGC
GCAGCAATTG GCTTAATGCT TTATGCCCTG AGTCAAAACA TTGATCTGTT TTACACACCT
TCGGAAGTTA TCGACGGCAA GCAAATAGGC CAAGTAACAG AAGTTCCTCA AGTGGGGCAG
CGTTTGCGTA TCGGAGGCAT GGTCGTTCCC GGTTCGGTTA AGCGTGACAA CGAAAGTTTA
GCGGTGAGTT TTGATTTAAT CGACACAGGT CCAATCGTGA CAGTGAGCTA CCAAGGTTTA
CTACCAGATT TGTTCCGTGA AGGTCAGGGC ATCGTCGCCA CGGGCGTTTT AACCGCCGAA
AATCACATTG AAGCACATGA AGTGCTGGCT AAGCACGACG AAGAATACAT GCCACCTGAG
TTAGCAGAAA AAATGAAAGG CATCAAACAT GTGAAGCCAG AGCAGGCTTA CTCAACGCCA
AAGGTGAGTG GCTGA
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| Protein sequence | MNPRRQKRLI VISAIVLVIG AAIGLMLYAL SQNIDLFYTP SEVIDGKQIG QVTEVPQVGQ
RLRIGGMVVP GSVKRDNESL AVSFDLIDTG PIVTVSYQGL LPDLFREGQG IVATGVLTAE
NHIEAHEVLA KHDEEYMPPE LAEKMKGIKH VKPEQAYSTP KVSG
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