| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3247 |
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| Symbol | |
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| ID | 4175024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3897176 |
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| End bp | 3897943 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638056278 |
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| Product | VacJ-like lipoprotein |
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| Protein accession | YP_662807 |
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| Protein GI | 109899552 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATAAAC TAAAAATAGG CTCGCTATTT TTTGTGTTAT TGACCTTGGG CGGCTGTGCG
TCAAGTAACA GCGCAGACGA ACAAGCGCAG GAATATAACG ACCCGAAAGA TCCGTTTGAA
TCCGTTAACC GTACCTTTTG GGATTTTAAC TACGACATTC TTGATAACTA CGTGCTACGG
CCAGTAACCG TGGTTTATGT TGATTACACG CCGCAATTTG CTCGTACTGG GTTATTCAAC
GCGGCGCTGA ATCTTGAAGA GCCTTCCAAC TCTTTGAACA ACTTATTGCA AGGCAAGCCT
GATGGCATGT TAATCAGTAT TGGCCGTTTC TTGTTAAATT CGACTGTAGG GCTTTTGGGT
ACGATAGATG TAGCAACCGA ATTAGGTCTT GTTCGCAATG AAGAAGAGTT TGGTGAAACA
TTAGGTAAGT GGGGCGTTGG GACAGGCCCT TACTTGATGA TACCTGCCTT AGGACCTAAC
GACATCCGAA GTGGAGTAGG GGACATTGTA GATACTTCCT ATACCCCGCT AGATGCGCTT
AACTTTTACT TTTCTGCTTT TAGAACGGGT ATTAAAGTAC TTGAGAGTCG TGCGACGTTG
ATGTCTCAAG AGCAGCAGCT TGAGCAATCT GCCGATCCTT ACAGCTTCGT TAAAAATGCA
TATTTCCAAA ACTTAGAGTT TAAAGTAAAA GACGGCCAAG TGGAAAAAAC ACAAGAAGAA
GAAGCCCTTG AAGATGATAT TGATGCGTAC TTGAATAGCC TTGAATAG
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| Protein sequence | MNKLKIGSLF FVLLTLGGCA SSNSADEQAQ EYNDPKDPFE SVNRTFWDFN YDILDNYVLR
PVTVVYVDYT PQFARTGLFN AALNLEEPSN SLNNLLQGKP DGMLISIGRF LLNSTVGLLG
TIDVATELGL VRNEEEFGET LGKWGVGTGP YLMIPALGPN DIRSGVGDIV DTSYTPLDAL
NFYFSAFRTG IKVLESRATL MSQEQQLEQS ADPYSFVKNA YFQNLEFKVK DGQVEKTQEE
EALEDDIDAY LNSLE
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