| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3230 |
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| Symbol | |
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| ID | 4175007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3878506 |
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| End bp | 3878925 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056261 |
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| Product | general secretion pathway protein G |
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| Protein accession | YP_662790 |
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| Protein GI | 109899535 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000198179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT GTAGTCAGCA AGGCTTTACC ATGATCGAAT TGCTTGTGGT GCTGGTTATC
TTAGGCTTGC TTGCGGGACT AGTCGGGCCA CAGTTTTTTG GCAAAGTGGA CAGCGCCAAA
GTACGTACAG CCGAAACCCA AGTGAAAATG TTAAAGATGG CAATACAAAC CTATCGTCTA
GATGTAGGCA CATATCCCTC ATCTTTAGGT GATTTGCACA GCGCGCCTAA TGACGTTAAA
AATTATTGGG ATGGCCCTTA TTTAGACGAA ACCTTACCCT TAGACCCTTG GAATAAAAAC
TACGAATACC GGGTTGACAG CAAAGCAGCC CAGGGTTTTT ACCTATACAG TTTAGGAGCT
GACGGAGTTG AAGGTGGTGA AGAACTCAAT GCCGATATAG GTTACGTACC CAGCGTTTAA
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| Protein sequence | MKKCSQQGFT MIELLVVLVI LGLLAGLVGP QFFGKVDSAK VRTAETQVKM LKMAIQTYRL
DVGTYPSSLG DLHSAPNDVK NYWDGPYLDE TLPLDPWNKN YEYRVDSKAA QGFYLYSLGA
DGVEGGEELN ADIGYVPSV
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