Gene Patl_3223 details

Gene Information

• Locus tag: Patl_3223
• ID: 4175000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 3872446
• End bp: 3873228
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638056254
• Product: hypothetical protein
• Protein accession: YP_662783
• Protein GI: 109899528

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0426372
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATACAA GTAGCCACCT AAATTTGTTT AATCTACATA TTATTGGTGT GCAAAAGGCA 
GGAACCACCG CATTAGCACA TTTTTTGAAT CAACACCCTG ATGTCTATGT GGCAGACCAT 
AAAGAGGCTC ACGTATTCGA TCACCCAGAT TTTAGCGACA GCAAAGATAA AACAGCTTTC 
GCACATCACC GCTATAACGC AAAGCTAACA AATTACCAAG ACCAAGCTAT CCGCTGTGAC 
GCTACGCCCA TCACCGCATT TCGGACTGAA TACTTGCAGG CCTGCTATCA ATACAACCCA 
GAGGCCAAGT TTATTATTCT GTTGCGTGAC CCAATCGAAA GAGCCGCGTC TCACTATCGA 
ATGTCACTCA GTCGTGGGCA AGAGCACCGC ACGATGTTGG GCGCATTTTT ACTTGAGCCA 
TTTCGGCTTA TGGGTATCAA AAAATCAGGC CCTTGGGGGT TCGATGATCC CTACCGCCAC 
CATTCTTATC TGAGGCGAGG CTGTTATGCA GCGCAACTAA AAAGAGTACT GGCCATTATT 
CCTAGGCAGC AATTATTAGT GCTACATCAA GAAGACTTAC AACAAAATCA TGAACACGTG 
CTGCATCAAA TATTCGAGTT TATCGGGGTG ACACCTGTAA ACGTGCCCGC CCAGCAAGTC 
TATGTGGGCA ACAAGCTCAA GCCGCGTATG TCAGATGCTC TCGCGAAATT TTACGCAAAG 
TGCTATTTCT CACTACGAAA AGAAAACATC ACACGCTGGC AACGTATCTT AGATAAGCGT 
TAA 

 

Protein sequence

MDTSSHLNLF NLHIIGVQKA GTTALAHFLN QHPDVYVADH KEAHVFDHPD FSDSKDKTAF 
AHHRYNAKLT NYQDQAIRCD ATPITAFRTE YLQACYQYNP EAKFIILLRD PIERAASHYR 
MSLSRGQEHR TMLGAFLLEP FRLMGIKKSG PWGFDDPYRH HSYLRRGCYA AQLKRVLAII 
PRQQLLVLHQ EDLQQNHEHV LHQIFEFIGV TPVNVPAQQV YVGNKLKPRM SDALAKFYAK 
CYFSLRKENI TRWQRILDKR