| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3220 |
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| Symbol | |
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| ID | 4174997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3868384 |
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| End bp | 3870405 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056251 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_662780 |
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| Protein GI | 109899525 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3551] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTA ATACACCGCG TTCGTGTGTC GTCGTTTTGG GCATGCACCG CTCTGGCACG
TCAGCCTTGG CCAAGACGAT TTGTGATATG GGATTCGAGC TGCCATCTGA CTCGATGCCT
GCTCATCATG TGGATAACCC AAACGGTTAT TTTGAAGCGA AAGAACTGGT TCAAATCCAT
AACCGTTTCT TGGACAGCGT GGGCTTAAAG TGGAATGCCA TTGAGCCCAT GCCATTGCAT
GTATTCGATG GGGAAAGCGC CAAGCAGGCC AAAGCAGAAT TATCAGCTTT ATTGGGCTTT
GCCTTTGAAC AAAAGCCACA ATTGGTGCTA AAAGATCCTC GATTATGTCG CCTTTTCCCC
CTGCTTTTGC CCGTGTTAAA AGCGTTAGGC TCGCAGGTTT CTGTCGTGTT CATTGTGCGC
GATGTAGATG CGGTTTATCA ATCTTTGGCA AAGCGTCAGC ATACCCCTGA AATTGCTCCA
GCTGCGATTA CCGACACGCA GCATGTAGAG CTTTTATGGC TGCGGCATAA CCTAGAGGCT
GAGCAACATA CCAGAGGCGT TAACCGCTTT TGCTTTAGTT ATGAAGATTG GTTAAATGAT
ACACAGACGA TAAACACAAA AATACGGCAC TTTTTGCAAG ATACTTTACC CAATGCGAAC
GTGTTAAGCC CGCCAGTATC AGTCAAAAAA CCGCGGCATT ATGCACTGTC CGGTAAGCTG
TTAACTGATT TAACTCGAGT CAATAGTTCC ATTTATGCTG CGCTTGCTGG CCGCGCTTCT
ATTGACGATA TCAATAACTG GTTTGATACG CTTTATGCGG TTTCTAGAAC CGCGATACCA
CAGCAATGCG AAGTGGTTAA TCACGCTCCG CCATTTTCGG TGAAACTCGC TGCTTATATT
AAACTGTTAA CCGCTCAAAG CGCGGTCGAT GTGACTCTAC TTGGTAACAG TGAGAAGGCA
AAGAATGCTT ATGTATTTAT TAGTGCAACG CCCGCTACCC GCAGTCACAT TTACCGTGTT
AAAAATCCAG TAGATGCGTT AATTAAAGAT GGACAACAGG CTTTTTGGAG CACACCAGAA
GGTATGTTGC CTCATGTGAA TTTACTCAGT ACAGCAAAAA GGGTGATTAT TCATCGCTGT
GAGTGGAGCC AAGCGTTAGC AAATATTACG CAAGTGTGCA GAGAAAATGA TGTATTGGTT
AGCTATGACA TTGATGATCT AATTATTGAT CGAAGCGTTA TCGAAGCAGG TTACATTGAT
TTTATTACCA GACAAAGCCT GCAAGAGAAA CAAGCGTGGT TAACCAAAGC TGATAGCTAT
TATCGCGCTT TAGCCTCGTG TGACGAGGTT CTTTGCAGCA CCCCAGCCCT AGCACGACAC
ATTCAAGGTA TGGGCCACTC CTGTAAAGTT GTGCCGAATG GTTTTTCCCC CGAGACCCAG
CTAATTAGTG AGCATTGGCG ACAATATGAA GAGCAATGTT TGCAGCCTGA AAAACGTATT
GGATATGCCA GTGGTACACC GACGCATAAT GCGGATTTTG CTACTATAGT GCGCCCTTTA
GGGATGTGGT TGCGGGAAAA TCCGGACTGG ACCTTCACTG CCATTGGTTA TTTGCAGCTG
GATGCGTTGC GTGAAATGGT ACCTGAAAAA CAAATTGAGT CGCGGCCATT AGTGCAACAT
TGTAACTTAC CGTACGAGTT ATCGCGTTTA AACATAAACT TGGTTCCGCT GCAACGTAAC
CCATTCTGTG ATGCTAAAAG TCCACTGAAG TGGTTTGAAG CCGCACTATG CGGCACCCCC
TCAATTGTCG CGGACAACCC AACCTATCGA CGGATATTTA GTGCAGCTGA TACATGTGTT
GGTTTGTTGG CAGATAATGA AGGCGACTGG GCAGCGCATA TTAATACGTT AGCGACCTCA
GCTGAGGCTC GAAAACAGAT TGCTAACGCT GCGCGAAAGC GTTGCCACCA GATTTTAAAT
AGTGCAGTAC TTAGTCAGCA ATATACATTA GATGGGGAAT AA
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| Protein sequence | MAINTPRSCV VVLGMHRSGT SALAKTICDM GFELPSDSMP AHHVDNPNGY FEAKELVQIH
NRFLDSVGLK WNAIEPMPLH VFDGESAKQA KAELSALLGF AFEQKPQLVL KDPRLCRLFP
LLLPVLKALG SQVSVVFIVR DVDAVYQSLA KRQHTPEIAP AAITDTQHVE LLWLRHNLEA
EQHTRGVNRF CFSYEDWLND TQTINTKIRH FLQDTLPNAN VLSPPVSVKK PRHYALSGKL
LTDLTRVNSS IYAALAGRAS IDDINNWFDT LYAVSRTAIP QQCEVVNHAP PFSVKLAAYI
KLLTAQSAVD VTLLGNSEKA KNAYVFISAT PATRSHIYRV KNPVDALIKD GQQAFWSTPE
GMLPHVNLLS TAKRVIIHRC EWSQALANIT QVCRENDVLV SYDIDDLIID RSVIEAGYID
FITRQSLQEK QAWLTKADSY YRALASCDEV LCSTPALARH IQGMGHSCKV VPNGFSPETQ
LISEHWRQYE EQCLQPEKRI GYASGTPTHN ADFATIVRPL GMWLRENPDW TFTAIGYLQL
DALREMVPEK QIESRPLVQH CNLPYELSRL NINLVPLQRN PFCDAKSPLK WFEAALCGTP
SIVADNPTYR RIFSAADTCV GLLADNEGDW AAHINTLATS AEARKQIANA ARKRCHQILN
SAVLSQQYTL DGE
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