| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3217 |
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| Symbol | |
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| ID | 4174994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3863042 |
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| End bp | 3864493 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638056248 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_662777 |
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| Protein GI | 109899522 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.353692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTAGCTC GCATTAAAAA CGCTATCAAA AATCAAATGG CTAAAGAGGC ATTGCTAAAT
ATTGATTTTA TCGCCACTCA AGATGACACC GTCATCTGTT TAGGCTGGGC AGCGCACAAA
ACAAATGATT TGAACGAGCG GCAACTAACA GCGAGCCAGT TGGGTCAGGA GACTGAAATA
GATCTTTTTA CCTTTGCTCG AAATGATGTC GTCCAGCGGT TTCAACTACC CCATGATGGT
TGCTGCTTTG GTTTCGTGGC CGTGATGTCA GGAGTCAAAG GAGATCTAGA TAATGTATTA
TTTAAGCATT CGAAAATAGA TTTTCCAATG TCTAAGCAAC GCTTTAAACG CGCACAAAAC
ATTGCTGAGA TACTTAGCCA CGTTTCCGAA CGTCAGGACG ATGCGATTAC CTTTATCGAA
AAGCATGGTT TGTCAATCGG CACAACAACT GGCTCTAGCC AGATGATCAT TCGTCACAGA
GACAAAGACG TAGAAAAAAT TAAGAGTATT CTACAGCGCG TTGATCTCAC CAAATCTGGT
GCGCTTGAAT ATTTATCCAG TGAATCACTG CCTGACATCC ATCGTATATG GAAAGCTAAG
CAATCAAAAA ATAATGGTAG TGAGTTAAAA ACTTATGGCG GTCTGATAGG TGAGCCTAAG
GTTAGTGTGG TTATTCCATT ATACGGTCGC TATGACTTTA TGCAGTTCCA ATTATCCAAT
TTCTCTTCAG ACCCATTTAT GCAAAGTGTT GAAGTGATCT ACGTATTGGA CGACCCTGCG
CTAATTCGAG AGGTGGTTAT CACCGCTCAC GGCTTATTTG AAACCTTTAG GTACCCTTTT
AAATTAGTTT TGTCTGAGCG TAATAGGGGG TTTGCTGGCG CAAATAATCT AGGAGTAGAG
TTTGTCACAG CTGAACGTTT ACTATTACTT AACTCTGATA TTTTACCTGA CAAAAATGAA
TGGTTGGGAG AGTACCTAGC TCAATTTGAA GCCCTTAGTG ATGTGGGGAT TTTGGGCGCC
ACACTAGTAT ATGAGGATAA TACGATACAG CATGCGGGCA TGGAATTTAG AGAAGACTCT
CATTATCCAG GCATATGGAT GAACCATCAC CCCTATAAAG GTATTCCTGT TGATCTTGTT
CCACTTGAAG CTGTTTTCGA GAGTAGTAAT ACAACTGGGG CTTGTATGTT GATGAACACC
GCGCTTTATA GAGAACTTAA TGGCTTTGAT TCTATGTATG TACTGGGAGA TTTTGAAGAT
TCAGACTTGT GTTTGAAAGT GATAAATCAT GGCTTGAAGA TTTACGTTTC GGGGTCTACT
CGGTTATACC ACTTGGAGCG ACTATCGCAA GATTTAGTAG ATAGTGGTGA CTGGAAATTC
AAACTAACGT TGGCGAATGG TGTTTATCAA GCCAATAAAT GGCGCAGCCT TATCCAAGGA
GTCGCAGTGT GA
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| Protein sequence | MLARIKNAIK NQMAKEALLN IDFIATQDDT VICLGWAAHK TNDLNERQLT ASQLGQETEI
DLFTFARNDV VQRFQLPHDG CCFGFVAVMS GVKGDLDNVL FKHSKIDFPM SKQRFKRAQN
IAEILSHVSE RQDDAITFIE KHGLSIGTTT GSSQMIIRHR DKDVEKIKSI LQRVDLTKSG
ALEYLSSESL PDIHRIWKAK QSKNNGSELK TYGGLIGEPK VSVVIPLYGR YDFMQFQLSN
FSSDPFMQSV EVIYVLDDPA LIREVVITAH GLFETFRYPF KLVLSERNRG FAGANNLGVE
FVTAERLLLL NSDILPDKNE WLGEYLAQFE ALSDVGILGA TLVYEDNTIQ HAGMEFREDS
HYPGIWMNHH PYKGIPVDLV PLEAVFESSN TTGACMLMNT ALYRELNGFD SMYVLGDFED
SDLCLKVINH GLKIYVSGST RLYHLERLSQ DLVDSGDWKF KLTLANGVYQ ANKWRSLIQG
VAV
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