| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3207 |
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| Symbol | |
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| ID | 4174984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3849839 |
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| End bp | 3851569 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638056238 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_662767 |
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| Protein GI | 109899512 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTTGG TAAAATATGT CGTAGGCCTA TTTCCAGAAA AAACTCGGAA GCACATGCGG
CAGCAGCTTT GGTTGTTCAA CCTATACAGT CGAAGTCTAC AAAAGTCTGG CTTGTTTTAC
GGTTTTCCTT CCCCTCTGAA ATTGCAAAAA CTCTATTGCA AAGCAATTGT AAAACAAGCT
ATTGAAATGG CTGACATATG TGAAAATAAG TTTGCAGATG AAAAGCTGAG TACTCTCGTG
ACCCTTAGTG GTCAGGTTGA CGCCGATCGC AATACCTTAT CTTCACTTAT AACGAACTCA
GCGGTTAGTG CTATTTACCT CCAGGGGCAG AGTGCTGATG TTAGTCGTCT TTTAGAAGAG
TTTTCTCATT CCTCCACGAA AGAACTTGGT GCATTGGACG ATTTAATAAA GTCAGAAAAC
AGAGATGGAT TGTTCGTTCT AAGAGGAGGA GACATTCTTC ACTGTGCTGC TACTAAAGTT
TTTGCATTTT ATGCAAAGCG AAACGATGAC AAACGAATAT TCTACTGTGA TATTGATTCG
ATAGATTGTA AAGGCGAGCG ACATCTCGCA GAGTTTTTCC CTGCTTGGAA CCCAGATCTA
CAACTTACTA CTGGTTACAT TAGAACTGGA GTGCTGATTC AAAAATCGAC CGATATCCAT
AATTTTTTGC ACTTCGTCAT TGATAATCAA GATGCAAGTG CTTTAGCACT TTGGCTTGCA
GATTATTATC TTAGAGAAGT TAAACTCAGT ATTGAGCACA TACCACTGTG TCTGGTGCAT
CAAACTTTTA AATATTCTTT GCAATGGGAT AGGGAGCTAC GCAAGCTGAA TAATGAACAG
TTTATTGTGA CCAAAGCTGA GGTGATTGGT CTTGCCAAGG TCGAGTGGTA CAAAGAAACA
CAACCTTTAG TCAGTTTGGT CATTCCGACC AAAAATGCAA AGAACTTAGT GCAGATGTGT
ATTTCATCAA TATTGTCAAA AACCAGCTAT CAGAACTTCG AAATTTTATT GATAGATAAT
AATTCAGATG ATCCAGAGGC TTTAGCTTAT TTTGATAAAC TGGTTGATTC AGAAGATAAG
GTTAGATTAC TCCGTTATCC ACATGAGTTT AATTATTCAG CCATTAACAA TTTTGCCGTG
GCTCACGCCA AAGGTGAAAT AGTGGGGTTG ATTAATAATG ATATTGAAGT CATTAGTGCA
AATTGGCTTA CAGATATGGT TGGCCACACT CTTAGAGCTG ATATTGGCTG TGTGGGGGCA
AAACTGTTAT ATCCTGATAT GCGTATTCAG CACGCGGGTG TAGTAATGGG TTATGGGGGG
GGGGCAGGCC ATGCACATAA ATACTTCCCC CGCTATCACC CTGGTTATTT AAATCGCCTT
GCCGTGACTA ATAATTTTAG TGCAGTGACA GCTGCCTGTC TTTTAGTCAA AAAGTCAGAC
TTCGATGCTG TTGGGGGGCT AAACCAAGAC GACCTTACAG TTGCCTTCAA CGATGTTGAT
TTCTGCCTAA GGATCAGGGA GCTTGGACGT CAAAATCTCT ATTGTGCTGA GGCTGAACTT
TTTCATCACG AGTCTATATC AAGAGGGGCT GATGACACAC TAGAGAAGAG ACAACGTTTT
GAGAATGAGT TGGATTATTT ACAGCGTAAA TGGCCTGAGT TAATTAAGAA TGATCCTGCT
TATAATCCGA ATCTAACGCT TAGGTTTGAA AATTTTTCTA TTAGAGAATG A
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| Protein sequence | MWLVKYVVGL FPEKTRKHMR QQLWLFNLYS RSLQKSGLFY GFPSPLKLQK LYCKAIVKQA
IEMADICENK FADEKLSTLV TLSGQVDADR NTLSSLITNS AVSAIYLQGQ SADVSRLLEE
FSHSSTKELG ALDDLIKSEN RDGLFVLRGG DILHCAATKV FAFYAKRNDD KRIFYCDIDS
IDCKGERHLA EFFPAWNPDL QLTTGYIRTG VLIQKSTDIH NFLHFVIDNQ DASALALWLA
DYYLREVKLS IEHIPLCLVH QTFKYSLQWD RELRKLNNEQ FIVTKAEVIG LAKVEWYKET
QPLVSLVIPT KNAKNLVQMC ISSILSKTSY QNFEILLIDN NSDDPEALAY FDKLVDSEDK
VRLLRYPHEF NYSAINNFAV AHAKGEIVGL INNDIEVISA NWLTDMVGHT LRADIGCVGA
KLLYPDMRIQ HAGVVMGYGG GAGHAHKYFP RYHPGYLNRL AVTNNFSAVT AACLLVKKSD
FDAVGGLNQD DLTVAFNDVD FCLRIRELGR QNLYCAEAEL FHHESISRGA DDTLEKRQRF
ENELDYLQRK WPELIKNDPA YNPNLTLRFE NFSIRE
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